RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 F8WEM9 126 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 SPINK4O60575 86 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 HMGN3Q15651 99 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 FXYD6Q9H0Q3 95 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 STAB2Q8WWQ8 2551 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 HECTD4Q9Y4D8 3996 aa-0.14□□□□□ -2.43
RAB5A-207ENST00000473608 ANKRD36A6QL64 1941 aa-0.15□□□□□ -2.43
RAB5A-207ENST00000473608 ETDBQ3ZM63 59 aa-0.15□□□□□ -2.43
RAB5A-207ENST00000473608 HIGD1BQ9P298 99 aa-0.15□□□□□ -2.43
RAB5A-207ENST00000473608 SRRM2Q9UQ35 2752 aaKnown RBP-0.15□□□□□ -2.43
RAB5A-207ENST00000473608 CCNB3Q8WWL7 1395 aa-0.16□□□□□ -2.43
RAB5A-207ENST00000473608 MAP1AP78559 2803 aaPredicted RBP-0.16□□□□□ -2.43
RAB5A-207ENST00000473608 ZNF720Q7Z2F6 126 aa-0.16□□□□□ -2.44
RAB5A-207ENST00000473608 FLNBO75369 2602 aaKnown RBP-0.16□□□□□ -2.44
RAB5A-207ENST00000473608 NBEAL1Q6ZS30 2694 aa-0.16□□□□□ -2.44
RAB5A-207ENST00000473608 AKAP12Q02952 1782 aa-0.17□□□□□ -2.44
RAB5A-207ENST00000473608 COL6A3P12111 3177 aa-0.17□□□□□ -2.44
RAB5A-207ENST00000473608 CPSF4LA6NMK7 179 aaKnown RBP-0.17□□□□□ -2.44
RAB5A-207ENST00000473608 APLNQ9ULZ1 77 aa-0.17□□□□□ -2.44
RAB5A-207ENST00000473608 NKTRP30414 1462 aaKnown RBP-0.17□□□□□ -2.44
RAB5A-207ENST00000473608 PDZD2O15018 2839 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 D6R8Y8 96 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 ALKAL2Q6UX46 152 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 MUSTN1Q8IVN3 82 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 DOPEY1Q5JWR5 2465 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 CCDC141Q6ZP82 1450 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 CLTCQ00610 1675 aaKnown RBP-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 EPRSP07814 1512 aaKnown RBP-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 MON2Q7Z3U7 1717 aa-0.18□□□□□ -2.44
RAB5A-207ENST00000473608 NF1P21359 2839 aa-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 LEPROTL1O95214 131 aa-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 C20orf78Q9BR46 151 aa-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 MUC12Q9UKN1 5478 aa-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 CNOT1A5YKK6 2376 aaKnown RBP-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 SAMD9Q5K651 1589 aa-0.19□□□□□ -2.44
RAB5A-207ENST00000473608 C5P01031 1676 aa-0.2□□□□□ -2.44
RAB5A-207ENST00000473608 FANCAO15360 1455 aa-0.2□□□□□ -2.44
RAB5A-207ENST00000473608 LRRC37AA6NMS7 1700 aa-0.21□□□□□ -2.44
RAB5A-207ENST00000473608 GYPAP02724 150 aa-0.21□□□□□ -2.44
RAB5A-207ENST00000473608 TROQ12816 1431 aaPredicted RBP-0.21□□□□□ -2.44
RAB5A-207ENST00000473608 CUX1P39880 1505 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 MYH4Q9Y623 1939 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 I3L3M4 83 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 IGLC2P0DOY2 106 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 IGLC3P0DOY3 106 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 REV3LO60673 3130 aa-0.22□□□□□ -2.44
RAB5A-207ENST00000473608 ATP10BO94823 1461 aa-0.22□□□□□ -2.45
RAB5A-207ENST00000473608 KIAA1551Q9HCM1 1747 aa-0.23□□□□□ -2.45
RAB5A-207ENST00000473608 UBE2D4Q9Y2X8 147 aa-0.23□□□□□ -2.45
RAB5A-207ENST00000473608 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
RAB5A-207ENST00000473608 CRYBG1Q9Y4K1 1723 aa-0.24□□□□□ -2.45
RAB5A-207ENST00000473608 LOC730098B7Z3J9 87 aa-0.24□□□□□ -2.45
RAB5A-207ENST00000473608 H1FX-AS1Q4G0G2 97 aa-0.24□□□□□ -2.45
RAB5A-207ENST00000473608 SETD2Q9BYW2 2564 aaPredicted RBP-0.24□□□□□ -2.45
RAB5A-207ENST00000473608 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
RAB5A-207ENST00000473608 HIVEP1P15822 2718 aa-0.25□□□□□ -2.45
RAB5A-207ENST00000473608 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
RAB5A-207ENST00000473608 MRPL34Q9BQ48 92 aaKnown RBP-0.26□□□□□ -2.45
RAB5A-207ENST00000473608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.26□□□□□ -2.452e-11■□□□□ 8.7
RAB5A-207ENST00000473608 MUC2Q02817 5179 aa-0.27□□□□□ -2.45
RAB5A-207ENST00000473608 HMGN2P05204 90 aaKnown RBP-0.27□□□□□ -2.45
RAB5A-207ENST00000473608 DEFB112Q30KQ8 113 aa-0.27□□□□□ -2.45
RAB5A-207ENST00000473608 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
RAB5A-207ENST00000473608 KNL1Q8NG31 2342 aa-0.27□□□□□ -2.45
RAB5A-207ENST00000473608 TGP01266 2768 aa-0.28□□□□□ -2.45
RAB5A-207ENST00000473608 MXRA5Q9NR99 2828 aa-0.28□□□□□ -2.45
RAB5A-207ENST00000473608 NEBP20929 6669 aa-0.28□□□□□ -2.45
RAB5A-207ENST00000473608 PCNX1Q96RV3 2341 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 CEP162Q5TB80 1403 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 TRANK1O15050 2925 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 M0R2T5 61 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 SMIM11AP58511 58 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 PEA15Q15121 130 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 EPG5Q9HCE0 2579 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 KIF20BQ96Q89 1820 aa-0.29□□□□□ -2.46
RAB5A-207ENST00000473608 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 NMSQ5H8A3 153 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 PYY3Q5JQD4 70 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 LELP1Q5T871 98 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 Q9H521 79 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 NEXMIFQ5QGS0 1516 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 UBR1Q8IWV7 1749 aa-0.3□□□□□ -2.46
RAB5A-207ENST00000473608 V9GYS6 101 aa-0.31□□□□□ -2.46
RAB5A-207ENST00000473608 FASNP49327 2511 aaKnown RBP-0.31□□□□□ -2.46
RAB5A-207ENST00000473608 MYO3AQ8NEV4 1616 aa-0.31□□□□□ -2.46
RAB5A-207ENST00000473608 PKHD1P08F94 4074 aa-0.32□□□□□ -2.46
RAB5A-207ENST00000473608 ITPR3Q14573 2671 aa-0.32□□□□□ -2.46
RAB5A-207ENST00000473608 NBASA2RRP1 2371 aa-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 CCL22O00626 93 aa-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 COL14A1Q05707 1796 aaKnown RBP-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 TTC37Q6PGP7 1564 aa-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 PKD1L3Q7Z443 1732 aa-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 PCLOQ9Y6V0 5065 aa-0.33□□□□□ -2.46
RAB5A-207ENST00000473608 MAGI2Q86UL8 1455 aa-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 ALKQ9UM73 1620 aa-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 RGPD4Q7Z3J3 1758 aa-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 IQCF6A8MYZ5 107 aa-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 K7EP34 96 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms