RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TRAV23DV6A0A075B6W5 121 aa4.21□□□□□ -1.74
HERC4-209ENST00000473533 SERP1Q9Y6X1 66 aa4.21□□□□□ -1.74
HERC4-209ENST00000473533 ANKRD17O75179 2603 aaKnown RBP4.21□□□□□ -1.74
HERC4-209ENST00000473533 WIPF1O43516 503 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 UBR5O95071 2799 aaPredicted RBP4.2□□□□□ -1.74
HERC4-209ENST00000473533 HECTD1Q9ULT8 2610 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 NBPF19A0A087WUL8 3843 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 DAD1P61803 113 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 F8P00451 2351 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 F8WDY8 70 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 IGLV6-57P01721 117 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 LELP1Q5T871 98 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
HERC4-209ENST00000473533 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 WFDC10AQ9H1F0 79 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 MIFP14174 115 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 COX7BP24311 80 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 LINC01547P58512 204 aaPredicted RBP4.19□□□□□ -1.74
HERC4-209ENST00000473533 HAMPP81172 84 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
HERC4-209ENST00000473533 ERC2-IT1O76042 136 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 Q6ZVQ6 151 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 X6R8D5 127 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 A0A1B0GW54 56 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 PLA2G2AP14555 144 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 HILS1P60008 231 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 FAM19A1Q7Z5A9 133 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 ESM1Q9NQ30 184 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
HERC4-209ENST00000473533 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
HERC4-209ENST00000473533 Q6ZQY7 126 aa4.17□□□□□ -1.74
HERC4-209ENST00000473533 KRTAP1-3Q8IUG1 177 aa4.17□□□□□ -1.74
HERC4-209ENST00000473533 MRAPQ8TCY5 172 aa4.17□□□□□ -1.74
HERC4-209ENST00000473533 PDZD2O15018 2839 aa4.17□□□□□ -1.74
HERC4-209ENST00000473533 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
HERC4-209ENST00000473533 M0R378 163 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
HERC4-209ENST00000473533 KRTAP10-9P60411 292 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 TRBV7-4A0A0J9YYF1 115 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 ELOF1P60002 83 aaKnown RBP4.16□□□□□ -1.74
HERC4-209ENST00000473533 EGFEM1PQ0D2K5 195 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 ATRQ13535 2644 aa4.16□□□□□ -1.74
HERC4-209ENST00000473533 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.74
HERC4-209ENST00000473533 UNQ6190/PRO20217Q6UXQ8 127 aa4.15□□□□□ -1.74
HERC4-209ENST00000473533 A0A096LPF7 62 aa4.15□□□□□ -1.74
HERC4-209ENST00000473533 WFDC9Q8NEX5 89 aa4.15□□□□□ -1.75
HERC4-209ENST00000473533 FLNAP21333 2647 aaKnown RBP4.15□□□□□ -1.75
HERC4-209ENST00000473533 C9orf116Q5BN46 136 aaPredicted RBP4.14□□□□□ -1.75
HERC4-209ENST00000473533 WFDC11Q8NEX6 87 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 APCP25054 2843 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 H3BNG1 76 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 H7BZZ5 65 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 ZNF843Q8N446 348 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 EPM2AB3EWF7 344 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 CAMK2N2Q96S95 79 aa4.14□□□□□ -1.75
HERC4-209ENST00000473533 TEP1Q99973 2627 aaKnown RBP4.13□□□□□ -1.75
HERC4-209ENST00000473533 Q8N3U1 123 aa4.13□□□□□ -1.75
HERC4-209ENST00000473533 KLK12Q9UKR0 248 aa4.13□□□□□ -1.75
HERC4-209ENST00000473533 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
HERC4-209ENST00000473533 NREPQ16612 68 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 HIGD2BQ4VC39 106 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 C10orf25Q5T742 122 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 C6orf48Q9UBA6 75 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 Q5XG85 94 aa4.12□□□□□ -1.75
HERC4-209ENST00000473533 F8WEM9 126 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 BPY2O14599 106 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 VPREB1P12018 145 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 UNC79Q9P2D8 2635 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 FUSP35637 526 aaKnown RBP eCLIP4.11□□□□□ -1.752e-6■■■■□ 19.5
HERC4-209ENST00000473533 Q8NAQ8 132 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 DHRS4-AS1Q9P1J3 65 aa4.11□□□□□ -1.75
HERC4-209ENST00000473533 LINC00528Q8N1L1 170 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 ITPR2Q14571 2701 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 HTN3P15516 51 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 NKAPP1Q8N9T2 125 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 Q8NDZ9 215 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 TRAV10A0A0B4J240 114 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 KRTAP1-1Q07627 177 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
HERC4-209ENST00000473533 C4orf26Q17RF5 130 aa4.09□□□□□ -1.75
HERC4-209ENST00000473533 OXTP01178 125 aa4.09□□□□□ -1.75
HERC4-209ENST00000473533 C1orf43Q9BWL3 253 aa4.09□□□□□ -1.75
HERC4-209ENST00000473533 XAGE1AQ9HD64 81 aa4.09□□□□□ -1.75
HERC4-209ENST00000473533 CELA1Q9UNI1 258 aa4.09□□□□□ -1.75
HERC4-209ENST00000473533 RMI2Q96E14 147 aa4.09□□□□□ -1.76
HERC4-209ENST00000473533 J3QKU1 62 aa4.08□□□□□ -1.76
HERC4-209ENST00000473533 PRYO14603 147 aa4.08□□□□□ -1.76
HERC4-209ENST00000473533 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
HERC4-209ENST00000473533 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
HERC4-209ENST00000473533 PLA2G2DQ9UNK4 145 aa4.08□□□□□ -1.76
HERC4-209ENST00000473533 NOTCH1P46531 2555 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms