RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 PFN2P35080 140 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 MIR7-3HGQ8N6C7 128 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
PCGF3-208ENST00000470161 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
PCGF3-208ENST00000470161 CXCL5P42830 114 aa12.56□□□□□ -0.4
PCGF3-208ENST00000470161 XGP55808 180 aa12.56□□□□□ -0.4
PCGF3-208ENST00000470161 A0A0B4J2C4 111 aa12.55□□□□□ -0.4
PCGF3-208ENST00000470161 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
PCGF3-208ENST00000470161 CNBPP62633 177 aaKnown RBP12.55□□□□□ -0.4
PCGF3-208ENST00000470161 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
PCGF3-208ENST00000470161 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
PCGF3-208ENST00000470161 ZNF561-AS1K7EIQ3 104 aa12.54□□□□□ -0.4
PCGF3-208ENST00000470161 TSPAN13O95857 204 aa12.54□□□□□ -0.4
PCGF3-208ENST00000470161 PRO1854Q9UHT4 67 aa12.54□□□□□ -0.4
PCGF3-208ENST00000470161 GVQW2A0A096LPI5 108 aaPredicted RBP12.53□□□□□ -0.4
PCGF3-208ENST00000470161 COPS9Q8WXC6 57 aa12.53□□□□□ -0.4
PCGF3-208ENST00000470161 HERC2O95714 4834 aa12.52□□□□□ -0.41
PCGF3-208ENST00000470161 DNAH8Q96JB1 4490 aa12.52□□□□□ -0.41
PCGF3-208ENST00000470161 FABP2P12104 132 aa12.51□□□□□ -0.41
PCGF3-208ENST00000470161 HAMPP81172 84 aa12.51□□□□□ -0.41
PCGF3-208ENST00000470161 C10orf25Q5T742 122 aa12.51□□□□□ -0.41
PCGF3-208ENST00000470161 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
PCGF3-208ENST00000470161 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
PCGF3-208ENST00000470161 RYR1P21817 5038 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 H7C2G1 150 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 SLPIP03973 132 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 UBE2V1Q13404 147 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 Q6ZSA8 131 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 Q8N1X5 172 aa12.5□□□□□ -0.41
PCGF3-208ENST00000470161 SPCS1Q9Y6A9 102 aa12.49□□□□□ -0.41
PCGF3-208ENST00000470161 HSPG2P98160 4391 aa12.49□□□□□ -0.41
PCGF3-208ENST00000470161 K7EP34 96 aa12.48□□□□□ -0.41
PCGF3-208ENST00000470161 SMR3BP02814 79 aaPredicted RBP12.48□□□□□ -0.41
PCGF3-208ENST00000470161 PPDPFQ9H3Y8 114 aa12.48□□□□□ -0.41
PCGF3-208ENST00000470161 GAGE10A6NGK3 116 aa12.47□□□□□ -0.41
PCGF3-208ENST00000470161 Q1RN00 199 aa12.46□□□□□ -0.41
PCGF3-208ENST00000470161 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.41
PCGF3-208ENST00000470161 DPH3Q96FX2 82 aa12.46□□□□□ -0.41
PCGF3-208ENST00000470161 RPL13AP40429 203 aaKnown RBP12.45□□□□□ -0.42
PCGF3-208ENST00000470161 COX17Q14061 63 aa12.45□□□□□ -0.42
PCGF3-208ENST00000470161 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
PCGF3-208ENST00000470161 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
PCGF3-208ENST00000470161 CARD19Q96LW7 228 aa12.45□□□□□ -0.42
PCGF3-208ENST00000470161 LOC107984156A0A0G2JMH3 177 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 EPM2AB3EWF7 344 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 SYCNQ0VAF6 134 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 SCXQ7RTU7 201 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 ARL17AQ8IVW1 177 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 CAMK2N2Q96S95 79 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 C6orf48Q9UBA6 75 aa12.44□□□□□ -0.42
PCGF3-208ENST00000470161 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
PCGF3-208ENST00000470161 PKIGQ9Y2B9 76 aa12.43□□□□□ -0.42
PCGF3-208ENST00000470161 CIRBP-AS1Q8TBR5 109 aa12.42□□□□□ -0.42
PCGF3-208ENST00000470161 PSMB2P49721 201 aa12.42□□□□□ -0.42
PCGF3-208ENST00000470161 Q6ZRU5 148 aa12.41□□□□□ -0.42
PCGF3-208ENST00000470161 C2orf48Q96LS8 159 aa12.41□□□□□ -0.42
PCGF3-208ENST00000470161 IGKV2-28A0A075B6P5 120 aa12.39□□□□□ -0.43
PCGF3-208ENST00000470161 IGKV2D-28P01615 120 aa12.39□□□□□ -0.43
PCGF3-208ENST00000470161 Q5VSD8 79 aa12.39□□□□□ -0.43
PCGF3-208ENST00000470161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.39□□□□□ -0.43
PCGF3-208ENST00000470161 TRBV30A0A0K0K1B3 111 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 KRTAP17-1Q9BYP8 105 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 KRTAP4-5Q9BYR2 181 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 IGKV2-24A0A0C4DH68 120 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 TRIAP1O43715 76 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 LYRM7Q5U5X0 104 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
PCGF3-208ENST00000470161 F8WDY8 70 aa12.37□□□□□ -0.43
PCGF3-208ENST00000470161 CHTF8P0CG12 524 aa12.36□□□□□ -0.43
PCGF3-208ENST00000470161 TRAV13-2A0A0B4J235 113 aa12.35□□□□□ -0.43
PCGF3-208ENST00000470161 PANO1I0J062 215 aa12.35□□□□□ -0.43
PCGF3-208ENST00000470161 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
PCGF3-208ENST00000470161 H3BMG7 143 aa12.35□□□□□ -0.43
PCGF3-208ENST00000470161 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
PCGF3-208ENST00000470161 TCL1BO95988 128 aa12.34□□□□□ -0.43
PCGF3-208ENST00000470161 FAT1Q14517 4588 aa12.34□□□□□ -0.43
PCGF3-208ENST00000470161 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
PCGF3-208ENST00000470161 Q8NDZ9 215 aa12.33□□□□□ -0.44
PCGF3-208ENST00000470161 SPACA4Q8TDM5 124 aa12.33□□□□□ -0.44
PCGF3-208ENST00000470161 PLA2G1BP04054 148 aaKnown RBP12.32□□□□□ -0.44
PCGF3-208ENST00000470161 PRR3P79522 188 aaKnown RBP12.32□□□□□ -0.44
PCGF3-208ENST00000470161 A0A087WYN8 130 aa12.32□□□□□ -0.44
PCGF3-208ENST00000470161 A0A096LNI7 61 aa12.32□□□□□ -0.44
PCGF3-208ENST00000470161 NDUFC2O95298 119 aa12.31□□□□□ -0.44
PCGF3-208ENST00000470161 GAGE2BQ13066 116 aa12.31□□□□□ -0.44
PCGF3-208ENST00000470161 RNF151Q2KHN1 245 aa12.31□□□□□ -0.44
PCGF3-208ENST00000470161 XAGE1AQ9HD64 81 aa12.31□□□□□ -0.44
PCGF3-208ENST00000470161 RPL18AQ02543 176 aaKnown RBP12.3□□□□□ -0.44
PCGF3-208ENST00000470161 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
PCGF3-208ENST00000470161 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
PCGF3-208ENST00000470161 NCR3O14931 201 aa12.29□□□□□ -0.44
PCGF3-208ENST00000470161 MTURNQ8N3F0 131 aa12.29□□□□□ -0.44
PCGF3-208ENST00000470161 SRRM2Q9UQ35 2752 aaKnown RBP12.29□□□□□ -0.44
PCGF3-208ENST00000470161 NDUFC2-KCTD14E9PQ53 114 aa12.29□□□□□ -0.44
PCGF3-208ENST00000470161 COX6CP09669 75 aa12.29□□□□□ -0.44
PCGF3-208ENST00000470161 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
PCGF3-208ENST00000470161 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
PCGF3-208ENST00000470161 PLAC8Q9NZF1 115 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms