RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
COL4A3-204ENST00000469504 PFN2P35080 140 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 IFITM2Q01629 132 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 RPS10P5Q9NQ39 176 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 TRAPPC1Q9Y5R8 145 aa6.45□□□□□ -1.38
COL4A3-204ENST00000469504 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 TSPAN13O95857 204 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 VPREB1P12018 145 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 NDUFA6P56556 154 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 C18orf32Q8TCD1 76 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
COL4A3-204ENST00000469504 TMEM126AQ9H061 195 aa6.43□□□□□ -1.38
COL4A3-204ENST00000469504 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
COL4A3-204ENST00000469504 BAGE3Q86Y29 109 aa6.42□□□□□ -1.38
COL4A3-204ENST00000469504 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
COL4A3-204ENST00000469504 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
COL4A3-204ENST00000469504 MUC2Q02817 5179 aa6.42□□□□□ -1.38
COL4A3-204ENST00000469504 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
COL4A3-204ENST00000469504 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
COL4A3-204ENST00000469504 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
COL4A3-204ENST00000469504 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
COL4A3-204ENST00000469504 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
COL4A3-204ENST00000469504 C11orf86A6NJI1 115 aa6.4□□□□□ -1.38
COL4A3-204ENST00000469504 M0R378 163 aa6.4□□□□□ -1.38
COL4A3-204ENST00000469504 LINC00587B1AMM8 73 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 SNAPINO95295 136 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 PRLHP81277 87 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 NDUFA5Q16718 116 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 SVBPQ8N300 66 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
COL4A3-204ENST00000469504 ANAPC11Q9NYG5 84 aa6.39□□□□□ -1.39
COL4A3-204ENST00000469504 CHTOPQ9Y3Y2 248 aaKnown RBP6.39□□□□□ -1.39
COL4A3-204ENST00000469504 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 SCO1O75880 301 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 SPAG11AQ6PDA7 123 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 CBLN2Q8IUK8 224 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 PLEKHB2Q96CS7 222 aa6.38□□□□□ -1.39
COL4A3-204ENST00000469504 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
COL4A3-204ENST00000469504 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
COL4A3-204ENST00000469504 LINC00158P58513 81 aa6.37□□□□□ -1.39
COL4A3-204ENST00000469504 HERV-K104P63124 156 aa6.37□□□□□ -1.39
COL4A3-204ENST00000469504 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
COL4A3-204ENST00000469504 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
COL4A3-204ENST00000469504 H3BS24 57 aa6.36□□□□□ -1.39
COL4A3-204ENST00000469504 ATP6V1G1O75348 118 aa6.36□□□□□ -1.39
COL4A3-204ENST00000469504 APOC3P02656 99 aa6.36□□□□□ -1.39
COL4A3-204ENST00000469504 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
COL4A3-204ENST00000469504 PRYO14603 147 aa6.35□□□□□ -1.39
COL4A3-204ENST00000469504 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
COL4A3-204ENST00000469504 S100A12P80511 92 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 MEIG1Q5JSS6 88 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 Q8NDZ9 215 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 MAP1LC3CQ9BXW4 147 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
COL4A3-204ENST00000469504 IGLV7-46A0A075B6I9 117 aa6.33□□□□□ -1.4
COL4A3-204ENST00000469504 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
COL4A3-204ENST00000469504 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
COL4A3-204ENST00000469504 MYMXA0A1B0GTQ4 84 aa6.32□□□□□ -1.4
COL4A3-204ENST00000469504 HSBP1O75506 76 aa6.32□□□□□ -1.4
COL4A3-204ENST00000469504 SPRR1AP35321 89 aa6.32□□□□□ -1.4
COL4A3-204ENST00000469504 BOD1L2Q8IYS8 172 aa6.32□□□□□ -1.4
COL4A3-204ENST00000469504 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
COL4A3-204ENST00000469504 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 C3orf22Q8N5N4 141 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
COL4A3-204ENST00000469504 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
COL4A3-204ENST00000469504 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
COL4A3-204ENST00000469504 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
COL4A3-204ENST00000469504 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
COL4A3-204ENST00000469504 KRTAP4-16G5E9R7 235 aaPredicted RBP6.29□□□□□ -1.4
COL4A3-204ENST00000469504 PLNP26678 52 aa6.29□□□□□ -1.4
COL4A3-204ENST00000469504 PPDPFQ9H3Y8 114 aa6.29□□□□□ -1.4
COL4A3-204ENST00000469504 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
COL4A3-204ENST00000469504 SPINK1P00995 79 aa6.28□□□□□ -1.4
COL4A3-204ENST00000469504 NMUP48645 174 aa6.28□□□□□ -1.4
COL4A3-204ENST00000469504 LINC00483Q53H64 154 aa6.28□□□□□ -1.4
COL4A3-204ENST00000469504 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 NCR3O14931 201 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 LEPROTO15243 131 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 LEPROTL1O95214 131 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 HERVK_113P61574 105 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
COL4A3-204ENST00000469504 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
COL4A3-204ENST00000469504 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
COL4A3-204ENST00000469504 Q8NBF4 154 aa6.26□□□□□ -1.41
COL4A3-204ENST00000469504 MIEN1Q9BRT3 115 aa6.26□□□□□ -1.41
COL4A3-204ENST00000469504 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
COL4A3-204ENST00000469504 DDTP30046 118 aa6.25□□□□□ -1.41
COL4A3-204ENST00000469504 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
COL4A3-204ENST00000469504 SPANXB1Q9NS25 103 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms