RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CARD19Q96LW7 228 aa5.27□□□□□ -1.57
NPHP3-204ENST00000469232 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
NPHP3-204ENST00000469232 DNAH5Q8TE73 4624 aa5.27□□□□□ -1.57
NPHP3-204ENST00000469232 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 NDUFC2-KCTD14E9PQ53 114 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 SMIM13P0DJ93 91 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 IFITM1P13164 125 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 DDTP30046 118 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 CIRBPQ14011 172 aaKnown RBP5.26□□□□□ -1.57
NPHP3-204ENST00000469232 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
NPHP3-204ENST00000469232 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
NPHP3-204ENST00000469232 C9orf116Q5BN46 136 aaPredicted RBP5.25□□□□□ -1.57
NPHP3-204ENST00000469232 RYR3Q15413 4870 aa5.25□□□□□ -1.57
NPHP3-204ENST00000469232 A0A1B0GVY2 172 aa5.24□□□□□ -1.57
NPHP3-204ENST00000469232 EPM2AB3EWF7 344 aa5.24□□□□□ -1.57
NPHP3-204ENST00000469232 HNRNPA3P51991 378 aaKnown RBP5.24□□□□□ -1.57
NPHP3-204ENST00000469232 HSD52Q0P140 79 aa5.24□□□□□ -1.57
NPHP3-204ENST00000469232 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
NPHP3-204ENST00000469232 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
NPHP3-204ENST00000469232 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 Q6ZRP5 223 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 LINC00308Q8TCZ7 52 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 LOC107984640A0A0U1RRK4 108 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 LINC00158P58513 81 aa5.23□□□□□ -1.57
NPHP3-204ENST00000469232 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
NPHP3-204ENST00000469232 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 C16orf90A8MZG2 172 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 GCSHP23434 173 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 PFN2P35080 140 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 CTAG1AP78358 180 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 CEND1Q8N111 149 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 COPS9Q8WXC6 57 aa5.22□□□□□ -1.57
NPHP3-204ENST00000469232 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
NPHP3-204ENST00000469232 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.21□□□□□ -1.58
NPHP3-204ENST00000469232 NDUFC2O95298 119 aa5.21□□□□□ -1.58
NPHP3-204ENST00000469232 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.58
NPHP3-204ENST00000469232 MUSTN1Q8IVN3 82 aa5.21□□□□□ -1.58
NPHP3-204ENST00000469232 SRSF9Q13242 221 aaKnown RBP eCLIP5.2□□□□□ -1.58
NPHP3-204ENST00000469232 BVES-AS1Q5T3Y7 98 aa5.2□□□□□ -1.58
NPHP3-204ENST00000469232 DAND5Q8N907 189 aa5.2□□□□□ -1.58
NPHP3-204ENST00000469232 HIST1H4GQ99525 98 aa5.2□□□□□ -1.58
NPHP3-204ENST00000469232 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
NPHP3-204ENST00000469232 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 FXYD2P54710 66 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 Q6ZSA8 131 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 KRTAP7-1Q8IUC3 87 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 Q8NDZ9 215 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 A0A096LNI7 61 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 IGLV5-52A0A0A0MRZ9 124 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 TRBV10-2A0A0K0K1G8 114 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 M0R143 59 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 VPREB1P12018 145 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 RPL24P83731 157 aaKnown RBP5.19□□□□□ -1.58
NPHP3-204ENST00000469232 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 LINC00474Q9P2X8 69 aa5.19□□□□□ -1.58
NPHP3-204ENST00000469232 A4D1N5 150 aa5.18□□□□□ -1.58
NPHP3-204ENST00000469232 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
NPHP3-204ENST00000469232 XAGE1AQ9HD64 81 aa5.18□□□□□ -1.58
NPHP3-204ENST00000469232 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 PANO1I0J062 215 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 RPL18AQ02543 176 aaKnown RBP5.17□□□□□ -1.58
NPHP3-204ENST00000469232 SNHG12Q9BXW3 62 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
NPHP3-204ENST00000469232 CFC1BP0CG36 223 aa5.16□□□□□ -1.58
NPHP3-204ENST00000469232 CFC1P0CG37 223 aa5.16□□□□□ -1.58
NPHP3-204ENST00000469232 GAGE2EQ4V326 116 aa5.16□□□□□ -1.58
NPHP3-204ENST00000469232 GAGE2DQ9UEU5 116 aa5.16□□□□□ -1.58
NPHP3-204ENST00000469232 A0A1W2PNN7 141 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 HINT1P49773 126 aaPredicted RBP5.15□□□□□ -1.58
NPHP3-204ENST00000469232 KRTAP10-1P60331 282 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 GAGE2BQ13066 116 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 LINC01620Q4KN68 170 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.58
NPHP3-204ENST00000469232 PCP4L1A6NKN8 68 aa5.15□□□□□ -1.59
NPHP3-204ENST00000469232 FUSP35637 526 aaKnown RBP eCLIP5.15□□□□□ -1.59
NPHP3-204ENST00000469232 NPC2P61916 151 aa5.15□□□□□ -1.59
NPHP3-204ENST00000469232 LINC00337Q8N6G1 96 aa5.15□□□□□ -1.59
NPHP3-204ENST00000469232 M0R378 163 aa5.14□□□□□ -1.59
NPHP3-204ENST00000469232 IGLV6-57P01721 117 aa5.14□□□□□ -1.59
NPHP3-204ENST00000469232 CHTF8P0CG12 524 aa5.14□□□□□ -1.59
NPHP3-204ENST00000469232 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
NPHP3-204ENST00000469232 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
NPHP3-204ENST00000469232 FAM168BA1KXE4 195 aa5.13□□□□□ -1.59
NPHP3-204ENST00000469232 C22orf24Q9Y442 160 aa5.13□□□□□ -1.59
NPHP3-204ENST00000469232 IGKV2-24A0A0C4DH68 120 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 A6NDN8 102 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 C9orf118A6NHY6 69 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
NPHP3-204ENST00000469232 NHP2Q9NX24 153 aaKnown RBP5.12□□□□□ -1.59
NPHP3-204ENST00000469232 FAM30AQ9NZY2 134 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 PRO1854Q9UHT4 67 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms