RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ANGP03950 147 aaKnown RBP8.69□□□□□ -1.02
USP11-206ENST00000469080 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
USP11-206ENST00000469080 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
USP11-206ENST00000469080 LINC00308Q8TCZ7 52 aa8.68□□□□□ -1.02
USP11-206ENST00000469080 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
USP11-206ENST00000469080 SLPIP03973 132 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 BEAN1Q3B7T3 259 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 TRBV6-5A0A0K0K1A5 114 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
USP11-206ENST00000469080 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
USP11-206ENST00000469080 A0A087WYN8 130 aa8.64□□□□□ -1.03
USP11-206ENST00000469080 LECT2O14960 151 aa8.64□□□□□ -1.03
USP11-206ENST00000469080 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
USP11-206ENST00000469080 HAMPP81172 84 aa8.63□□□□□ -1.03
USP11-206ENST00000469080 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
USP11-206ENST00000469080 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 STAB2Q8WWQ8 2551 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 CRPP02741 224 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 C9orf66Q5T8R8 295 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 LINC00269Q8N2A0 174 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
USP11-206ENST00000469080 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
USP11-206ENST00000469080 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
USP11-206ENST00000469080 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
USP11-206ENST00000469080 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
USP11-206ENST00000469080 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
USP11-206ENST00000469080 CELA1Q9UNI1 258 aa8.6□□□□□ -1.03
USP11-206ENST00000469080 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
USP11-206ENST00000469080 IGHV4-30-4P0DP06 118 aa8.6□□□□□ -1.03
USP11-206ENST00000469080 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
USP11-206ENST00000469080 MIFP14174 115 aa8.59□□□□□ -1.03
USP11-206ENST00000469080 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.03
USP11-206ENST00000469080 PSPHP1O15172 72 aa8.59□□□□□ -1.04
USP11-206ENST00000469080 ATP5EP2Q5VTU8 51 aa8.59□□□□□ -1.04
USP11-206ENST00000469080 ESRGQ1W209 222 aa8.58□□□□□ -1.04
USP11-206ENST00000469080 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
USP11-206ENST00000469080 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
USP11-206ENST00000469080 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 ANK3Q12955 4377 aaKnown RBP8.57□□□□□ -1.04
USP11-206ENST00000469080 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 Q6ZRU5 148 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 C19orf73Q9NVV2 129 aa8.57□□□□□ -1.04
USP11-206ENST00000469080 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
USP11-206ENST00000469080 NDUFC1O43677 76 aa8.56□□□□□ -1.04
USP11-206ENST00000469080 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
USP11-206ENST00000469080 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
USP11-206ENST00000469080 APOC4P55056 127 aa8.56□□□□□ -1.04
USP11-206ENST00000469080 ORMDL1Q9P0S3 153 aa8.56□□□□□ -1.04
USP11-206ENST00000469080 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
USP11-206ENST00000469080 NDUFA1O15239 70 aa8.55□□□□□ -1.04
USP11-206ENST00000469080 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
USP11-206ENST00000469080 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
USP11-206ENST00000469080 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
USP11-206ENST00000469080 SMIM11BQ8TCY0 68 aa8.54□□□□□ -1.04
USP11-206ENST00000469080 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP11-206ENST00000469080 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
USP11-206ENST00000469080 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
USP11-206ENST00000469080 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
USP11-206ENST00000469080 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
USP11-206ENST00000469080 SCXQ7RTU7 201 aa8.52□□□□□ -1.05
USP11-206ENST00000469080 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
USP11-206ENST00000469080 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
USP11-206ENST00000469080 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
USP11-206ENST00000469080 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
USP11-206ENST00000469080 CSNK1G2-AS1Q8NCQ2 148 aa8.51□□□□□ -1.05
USP11-206ENST00000469080 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
USP11-206ENST00000469080 X6R8D5 127 aa8.51□□□□□ -1.05
USP11-206ENST00000469080 H0YGX0 51 aa8.5□□□□□ -1.05
USP11-206ENST00000469080 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
USP11-206ENST00000469080 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
USP11-206ENST00000469080 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
USP11-206ENST00000469080 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
USP11-206ENST00000469080 Q6ZTC4 211 aa8.49□□□□□ -1.05
USP11-206ENST00000469080 LINC00959A0A1B0GUT2 108 aa8.49□□□□□ -1.05
USP11-206ENST00000469080 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
USP11-206ENST00000469080 TRBV10-3A0A0K0K1G6 114 aa8.48□□□□□ -1.05
USP11-206ENST00000469080 REG3AQ06141 175 aa8.48□□□□□ -1.05
USP11-206ENST00000469080 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
USP11-206ENST00000469080 IGKV2D-24A0A075B6R9 120 aa8.48□□□□□ -1.05
USP11-206ENST00000469080 JMJD7-PLA2G4BH0Y9G9 81 aa8.47□□□□□ -1.05
USP11-206ENST00000469080 NREPQ16612 68 aa8.47□□□□□ -1.05
USP11-206ENST00000469080 H3BS24 57 aa8.47□□□□□ -1.05
USP11-206ENST00000469080 A0A0J9YWU9 116 aa8.46□□□□□ -1.05
USP11-206ENST00000469080 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.05
USP11-206ENST00000469080 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
USP11-206ENST00000469080 A8MTW9 85 aa8.45□□□□□ -1.06
USP11-206ENST00000469080 A8MU10 97 aa8.45□□□□□ -1.06
USP11-206ENST00000469080 BCE1O60756 84 aa8.45□□□□□ -1.06
USP11-206ENST00000469080 PRYO14603 147 aa8.44□□□□□ -1.06
USP11-206ENST00000469080 KPRPQ5T749 579 aaPredicted RBP8.43□□□□□ -1.06
USP11-206ENST00000469080 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
USP11-206ENST00000469080 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 556.4 ms