RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 IGFL3Q6UXB1 125 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-207ENST00000468925 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 Q9BRP9 147 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 CADP27708 2225 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 FBN2P35556 2912 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3OR16-8A0A075B7F1 116 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3-74A0A0B4J1X5 117 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 PSCAO43653 123 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 ZNF73O43830 326 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV4-59P01825 116 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV4-30-4P0DP06 118 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 LMO4P61968 165 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 ATP1A1-AS1Q5TC04 95 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 C5orf56Q8N8D9 126 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 UBE2E2Q96LR5 201 aa3.34□□□□□ -1.87
SF3B1-207ENST00000468925 RELNP78509 3460 aa3.34□□□□□ -1.88
SF3B1-207ENST00000468925 PLCE1Q9P212 2302 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 C2CD3Q4AC94 2353 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 IGHV3-49A0A0A0MS15 119 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 ETDCA0A1B0GVM5 59 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
SF3B1-207ENST00000468925 Q6ZTI0 123 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 ZNF843Q8N446 348 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 NKAPP1Q8N9T2 125 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
SF3B1-207ENST00000468925 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 FAM215AQ9Y5M1 114 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
SF3B1-207ENST00000468925 CELSR3Q9NYQ7 3312 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 IGHV3OR16-9A0A0B4J2B5 98 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 LOC101927531A0A1B0GV80 90 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 CDK2AP2O75956 126 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 INSP01308 110 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 IGKV4-1P06312 121 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 MP68P56378 58 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 DNHD1Q96M86 4753 aa3.32□□□□□ -1.88
SF3B1-207ENST00000468925 TRGV2A0A075B6R0 118 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 A6NN06 94 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 HCG22E2RYF7 251 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 G3V318 75 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 IGHV3-11P01762 117 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 Q5VV11 94 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 TOMM7Q9P0U1 55 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 LAMA1P25391 3075 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 ABCA4P78363 2273 aa3.31□□□□□ -1.88
SF3B1-207ENST00000468925 AHCTF1Q8WYP5 2266 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 A0A096LNT2 108 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 IGHV4-61A0A0C4DH41 118 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 A0A1B0GUV1 79 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 PSPHP1O15172 72 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-207ENST00000468925 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
SF3B1-207ENST00000468925 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 ODF3L2Q3SX64 289 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 C6orf99Q4VX62 202 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 FDCSPQ8NFU4 85 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 B9D2Q9BPU9 175 aa3.3□□□□□ -1.88
SF3B1-207ENST00000468925 IGLV9-49A0A0B4J1Y8 123 aa3.29□□□□□ -1.88
SF3B1-207ENST00000468925 IGLV6-57P01721 117 aa3.29□□□□□ -1.88
SF3B1-207ENST00000468925 IGHV3-73A0A0B4J1V6 119 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 A6NED7 52 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 A8MUN3 132 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 C16orf90A8MZG2 172 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 C8orf87E5RJ46 101 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 PRM2P04554 102 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 C9orf116Q5BN46 136 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-207ENST00000468925 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 Q6ZQY7 126 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 Q8N9P0 234 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-207ENST00000468925 LINC00208Q96KT6 92 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 ICE1Q9Y2F5 2266 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 NF1P21359 2839 aa3.28□□□□□ -1.88
SF3B1-207ENST00000468925 SETD2Q9BYW2 2564 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-207ENST00000468925 GVQW2A0A096LPI5 108 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-207ENST00000468925 C19orf84I3L1E1 186 aa3.27□□□□□ -1.89
SF3B1-207ENST00000468925 PRB1P04280 392 aa3.27□□□□□ -1.89
SF3B1-207ENST00000468925 CASC2Q6XLA1 102 aa3.27□□□□□ -1.89
SF3B1-207ENST00000468925 C11orf45Q8TAV5 145 aa3.27□□□□□ -1.89
SF3B1-207ENST00000468925 POLQO75417 2590 aa3.27□□□□□ -1.89
SF3B1-207ENST00000468925 FLNCQ14315 2725 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 IGKV3-7A0A075B6H7 116 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 DEFB1P60022 68 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms