RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.3
MSX1-202ENST00000468421 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
MSX1-202ENST00000468421 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
MSX1-202ENST00000468421 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.3
MSX1-202ENST00000468421 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.3
MSX1-202ENST00000468421 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
MSX1-202ENST00000468421 A0A096LNI7 61 aa6.89□□□□□ -1.31
MSX1-202ENST00000468421 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
MSX1-202ENST00000468421 PPDPFQ9H3Y8 114 aa6.89□□□□□ -1.31
MSX1-202ENST00000468421 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
MSX1-202ENST00000468421 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
MSX1-202ENST00000468421 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 K7ERJ3 54 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 CFC1P0CG37 223 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
MSX1-202ENST00000468421 IGKV2-28A0A075B6P5 120 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 A0A1B0GWB2 263 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 A6NJY4 79 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 PANO1I0J062 215 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 IGKV2D-28P01615 120 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 VPREB1P12018 145 aa6.86□□□□□ -1.31
MSX1-202ENST00000468421 PRR3P79522 188 aaKnown RBP6.86□□□□□ -1.31
MSX1-202ENST00000468421 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 FAM168BA1KXE4 195 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 NCR3O14931 201 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 NDUFC2O95298 119 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
MSX1-202ENST00000468421 A6NDN8 102 aa6.84□□□□□ -1.31
MSX1-202ENST00000468421 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
MSX1-202ENST00000468421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
MSX1-202ENST00000468421 PKD1P98161 4303 aa6.84□□□□□ -1.31
MSX1-202ENST00000468421 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
MSX1-202ENST00000468421 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
MSX1-202ENST00000468421 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
MSX1-202ENST00000468421 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
MSX1-202ENST00000468421 SPACA4Q8TDM5 124 aa6.82□□□□□ -1.32
MSX1-202ENST00000468421 RAB37Q96AX2 223 aa6.82□□□□□ -1.32
MSX1-202ENST00000468421 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
MSX1-202ENST00000468421 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
MSX1-202ENST00000468421 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
MSX1-202ENST00000468421 TAX1BP3O14907 124 aa6.81□□□□□ -1.32
MSX1-202ENST00000468421 RPL13AP40429 203 aaKnown RBP6.81□□□□□ -1.32
MSX1-202ENST00000468421 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 TRBV10-2A0A0K0K1G8 114 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 COL5A1-AS1Q5SY13 56 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
MSX1-202ENST00000468421 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
MSX1-202ENST00000468421 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 H7C2G1 150 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 M0R378 163 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 TSPAN13O95857 204 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 NAA38Q9BRA0 125 aaKnown RBP6.79□□□□□ -1.32
MSX1-202ENST00000468421 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 RYR1P21817 5038 aa6.79□□□□□ -1.32
MSX1-202ENST00000468421 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
MSX1-202ENST00000468421 HERC2O95714 4834 aa6.78□□□□□ -1.32
MSX1-202ENST00000468421 TRBV10-3A0A0K0K1G6 114 aa6.78□□□□□ -1.32
MSX1-202ENST00000468421 GAGE10A6NGK3 116 aa6.78□□□□□ -1.32
MSX1-202ENST00000468421 M0QXV9 152 aa6.78□□□□□ -1.32
MSX1-202ENST00000468421 A0A087WYN8 130 aa6.77□□□□□ -1.33
MSX1-202ENST00000468421 EPM2AB3EWF7 344 aa6.77□□□□□ -1.33
MSX1-202ENST00000468421 IGLV6-57P01721 117 aa6.77□□□□□ -1.33
MSX1-202ENST00000468421 S100A7L2Q5SY68 101 aa6.77□□□□□ -1.33
MSX1-202ENST00000468421 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
MSX1-202ENST00000468421 Q1RN00 199 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 Q6ZSA8 131 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 PHF5AQ7RTV0 110 aaKnown RBP6.76□□□□□ -1.33
MSX1-202ENST00000468421 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
MSX1-202ENST00000468421 C9orf118A6NHY6 69 aa6.75□□□□□ -1.33
MSX1-202ENST00000468421 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
MSX1-202ENST00000468421 H3BUT2 72 aa6.75□□□□□ -1.33
MSX1-202ENST00000468421 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
MSX1-202ENST00000468421 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
MSX1-202ENST00000468421 TRIAP1O43715 76 aa6.74□□□□□ -1.33
MSX1-202ENST00000468421 HAMPP81172 84 aa6.74□□□□□ -1.33
MSX1-202ENST00000468421 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
MSX1-202ENST00000468421 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
MSX1-202ENST00000468421 SCXQ7RTU7 201 aa6.73□□□□□ -1.33
MSX1-202ENST00000468421 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
MSX1-202ENST00000468421 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
MSX1-202ENST00000468421 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms