RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TRAV13-1A0A0B4J241 112 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 M0QXV9 152 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 FOXI1Q12951 378 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 RNF151Q2KHN1 245 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 SFTA2Q6UW10 78 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
RTFDC1-205ENST00000466260 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 K7ERJ3 54 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 COX6CP09669 75 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 LINC00526Q96FQ7 95 aa6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 OPRPNQ99935 248 aaPredicted RBP6.3□□□□□ -1.4
RTFDC1-205ENST00000466260 H3BMG7 143 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 HERV-K104P63124 156 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 CFAP161Q6P656 301 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 Q6ZSA8 131 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
RTFDC1-205ENST00000466260 LOC107984156A0A0G2JMH3 177 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 SLPIP03973 132 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 MALP21145 153 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 PCP4P48539 62 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 C5orf38Q86SI9 138 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 ARL17AQ8IVW1 177 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
RTFDC1-205ENST00000466260 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 NDUFA1O15239 70 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 APOMO95445 188 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 TSPAN13O95857 204 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 CHTF8P0CG12 524 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 CFC1BP0CG36 223 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 CFC1P0CG37 223 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 CD164L2Q6UWJ8 174 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 NAA38Q9BRA0 125 aaKnown RBP6.27□□□□□ -1.41
RTFDC1-205ENST00000466260 FAT1Q14517 4588 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 GVQW2A0A096LPI5 108 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 PANO1I0J062 215 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 COX7A2LO14548 114 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 PSMB2P49721 201 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
RTFDC1-205ENST00000466260 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
RTFDC1-205ENST00000466260 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
RTFDC1-205ENST00000466260 A4D1N5 150 aa6.25□□□□□ -1.41
RTFDC1-205ENST00000466260 INAFM2P0DMQ5 153 aa6.25□□□□□ -1.41
RTFDC1-205ENST00000466260 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
RTFDC1-205ENST00000466260 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 COX6A2Q02221 97 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 Q1RN00 199 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 SDIM1Q6ZPB5 146 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 PPDPFLQ8WWR9 84 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
RTFDC1-205ENST00000466260 PRSS2P07478 247 aa6.23□□□□□ -1.41
RTFDC1-205ENST00000466260 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
RTFDC1-205ENST00000466260 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
RTFDC1-205ENST00000466260 PRO0461Q9UI25 63 aa6.23□□□□□ -1.41
RTFDC1-205ENST00000466260 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
RTFDC1-205ENST00000466260 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 SYCNQ0VAF6 134 aa6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 Q6ZRU5 148 aa6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 SIGMAR1Q99720 223 aa6.22□□□□□ -1.41
RTFDC1-205ENST00000466260 A0A096LNI7 61 aa6.21□□□□□ -1.42
RTFDC1-205ENST00000466260 H3BT86 120 aa6.21□□□□□ -1.42
RTFDC1-205ENST00000466260 ETDBQ3ZM63 59 aa6.21□□□□□ -1.42
RTFDC1-205ENST00000466260 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
RTFDC1-205ENST00000466260 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 A0A087WYN8 130 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 MTURNQ8N3F0 131 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 LITAFQ99732 161 aa6.2□□□□□ -1.42
RTFDC1-205ENST00000466260 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
RTFDC1-205ENST00000466260 SLC25A20O43772 301 aa6.19□□□□□ -1.42
RTFDC1-205ENST00000466260 TCL1BO95988 128 aa6.19□□□□□ -1.42
RTFDC1-205ENST00000466260 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-205ENST00000466260 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
RTFDC1-205ENST00000466260 TRAV13-2A0A0B4J235 113 aa6.18□□□□□ -1.42
RTFDC1-205ENST00000466260 TRBV10-2A0A0K0K1G8 114 aa6.18□□□□□ -1.42
RTFDC1-205ENST00000466260 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
RTFDC1-205ENST00000466260 MEIG1Q5JSS6 88 aa6.18□□□□□ -1.42
RTFDC1-205ENST00000466260 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
RTFDC1-205ENST00000466260 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
RTFDC1-205ENST00000466260 C2orf48Q96LS8 159 aa6.17□□□□□ -1.42
RTFDC1-205ENST00000466260 A0A087WZ39 114 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms