RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 LINC00242Q5T6M2 205 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 LINC00643Q86TS7 51 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 UBE2WQ96B02 151 aa4.07□□□□□ -1.76
CHMP3-206ENST00000466032 OPRPNQ99935 248 aaPredicted RBP4.07□□□□□ -1.76
CHMP3-206ENST00000466032 IGKV2D-26A0A0A0MRZ7 120 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3OR16-9A0A0B4J2B5 98 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV1-58A0A0C4DH39 117 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 TRBV10-2A0A0K0K1G8 114 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 TMEM223A0PJW6 202 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 K7ERJ3 54 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 ATOX1O00244 68 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 LEPROTO15243 131 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3-30P01768 117 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3-33P01772 117 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3-30-3P0DP02 117 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3-30-5P0DP03 117 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 MALP21145 153 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 ATXN8Q156A1 80 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
CHMP3-206ENST00000466032 CHCHD10Q8WYQ3 142 aaPredicted RBP4.06□□□□□ -1.76
CHMP3-206ENST00000466032 NAA38Q9BRA0 125 aaKnown RBP4.06□□□□□ -1.76
CHMP3-206ENST00000466032 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.05□□□□□ -1.76
CHMP3-206ENST00000466032 NBDYA0A0U1RRE5 68 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 BCE1O60756 84 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 PRSS2P07478 247 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 ZNF22P17026 224 aaPredicted RBP4.05□□□□□ -1.76
CHMP3-206ENST00000466032 C14orf177Q52M58 125 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
CHMP3-206ENST00000466032 ENHOQ6UWT2 76 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 COPS9Q8WXC6 57 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 CDKN2A-AS1Q9UH64 79 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
CHMP3-206ENST00000466032 IGKV2D-24A0A075B6R9 120 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 TCL1BO95988 128 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 LGALS3P17931 250 aaKnown RBP4.04□□□□□ -1.76
CHMP3-206ENST00000466032 XCL1P47992 114 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 C5orf38Q86SI9 138 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 Q8IZM0 81 aa4.04□□□□□ -1.76
CHMP3-206ENST00000466032 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 IGHV3-64A0A075B6Q5 118 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 J3QQQ9 107 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 PSCAO43653 123 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 COX6A2Q02221 97 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
CHMP3-206ENST00000466032 C6orf226Q5I0X4 101 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 DAND5Q8N907 189 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 COX7B2Q8TF08 81 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 LINC00476Q8WZB0 136 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 C2orf48Q96LS8 159 aa4.03□□□□□ -1.76
CHMP3-206ENST00000466032 ZNF561-AS1K7EIQ3 104 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 NDUFC2O95298 119 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 PSMB2P49721 201 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 COX17Q14061 63 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 LINC01620Q4KN68 170 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 GAGE2AQ6NT46 116 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
CHMP3-206ENST00000466032 IGLV10-54A0A075B6I4 117 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 ZNF815PA8K554 130 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 NDUFA1O15239 70 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 TIMM17BO60830 172 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 LY6G6CO95867 125 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 TRACP01848 142 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 COX6CP09669 75 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 C6orf223Q8N319 242 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 Q9HAA7 133 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
CHMP3-206ENST00000466032 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 GVQW2A0A096LPI5 108 aaPredicted RBP4□□□□□ -1.77
CHMP3-206ENST00000466032 CFC1BP0CG36 223 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 CFC1P0CG37 223 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
CHMP3-206ENST00000466032 SPAG11BQ08648 103 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 SRSF9Q13242 221 aaKnown RBP eCLIP4□□□□□ -1.77
CHMP3-206ENST00000466032 C1orf134Q5TEV5 83 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 KRTAP26-1Q6PEX3 210 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 Q6ZR54 194 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 Q8N1X5 172 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 MAPKAPK5-AS1Q8N8E1 139 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
CHMP3-206ENST00000466032 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
CHMP3-206ENST00000466032 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
CHMP3-206ENST00000466032 INAFM2P0DMQ5 153 aa3.99□□□□□ -1.77
CHMP3-206ENST00000466032 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
CHMP3-206ENST00000466032 Q5XG85 94 aa3.99□□□□□ -1.77
CHMP3-206ENST00000466032 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
CHMP3-206ENST00000466032 NTN5Q8WTR8 489 aaPredicted RBP3.99□□□□□ -1.77
CHMP3-206ENST00000466032 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms