RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	USP17L23	D6RBM5	183 aa		5.76	□□□□□ -1.49
UBA3-208	ENST00000465627		F8WDY8	70 aa		5.76	□□□□□ -1.49
UBA3-208	ENST00000465627	SLPI	P03973	132 aa		5.76	□□□□□ -1.49
UBA3-208	ENST00000465627	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.76	□□□□□ -1.49
UBA3-208	ENST00000465627	SCGB1D4	Q6XE38	83 aa		5.76	□□□□□ -1.49
UBA3-208	ENST00000465627	DNAH5	Q8TE73	4624 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627	FXYD2	P54710	66 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627	SOSTDC1	Q6X4U4	206 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627		Q6ZVH6	145 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627	CEND1	Q8N111	149 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627	C6orf48	Q9UBA6	75 aa		5.75	□□□□□ -1.49
UBA3-208	ENST00000465627	DNAH8	Q96JB1	4490 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	LOC107984156	A0A0G2JMH3	177 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627		A0A1B0GWB2	263 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	TMEM238	C9JI98	176 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	PRSS2	P07478	247 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	SMIM13	P0DJ93	91 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	HINT1	P49773	126 aa	Predicted RBP	5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	KRTAP10-2	P60368	255 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	HIGD2B	Q4VC39	106 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	ARL17A	Q8IVW1	177 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627		Q8N1X5	172 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627	ERG28	Q9UKR5	140 aa		5.74	□□□□□ -1.49
UBA3-208	ENST00000465627		M0R143	59 aa		5.73	□□□□□ -1.49
UBA3-208	ENST00000465627	CKS1B	P61024	79 aa		5.73	□□□□□ -1.49
UBA3-208	ENST00000465627	COX17	Q14061	63 aa		5.73	□□□□□ -1.49
UBA3-208	ENST00000465627	C9orf116	Q5BN46	136 aa	Predicted RBP	5.73	□□□□□ -1.49
UBA3-208	ENST00000465627		Q6ZRU5	148 aa		5.73	□□□□□ -1.49
UBA3-208	ENST00000465627	HIST1H4G	Q99525	98 aa		5.73	□□□□□ -1.49
UBA3-208	ENST00000465627	TRBV30	A0A0K0K1B3	111 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	ZNF561-AS1	K7EIQ3	104 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627		M0R2N4	97 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	IFITM1	P13164	125 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	RNF151	Q2KHN1	245 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	MUSTN1	Q8IVN3	82 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	MIR7-3HG	Q8N6C7	128 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	DAND5	Q8N907	189 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	LINC00308	Q8TCZ7	52 aa		5.72	□□□□□ -1.49
UBA3-208	ENST00000465627	LRP1B	Q9NZR2	4599 aa		5.71	□□□□□ -1.49
UBA3-208	ENST00000465627	GCSH	P23434	173 aa		5.71	□□□□□ -1.5
UBA3-208	ENST00000465627	CNBP	P62633	177 aa	Known RBP	5.71	□□□□□ -1.5
UBA3-208	ENST00000465627	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
UBA3-208	ENST00000465627	CIRBP	Q14011	172 aa	Known RBP	5.71	□□□□□ -1.5
UBA3-208	ENST00000465627	LECT2	O14960	151 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627	TLX1NB	P0CAT3	122 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627	SYCN	Q0VAF6	134 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627	MEIG1	Q5JSS6	88 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627	CAMK2N2	Q96S95	79 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627	MUC2	Q02817	5179 aa		5.7	□□□□□ -1.5
UBA3-208	ENST00000465627		A0A0U1RRA0	63 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627		A4D1N5	150 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	CFC1B	P0CG36	223 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	CFC1	P0CG37	223 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	PFN2	P35080	140 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	LINC00158	P58513	81 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	LBH	Q53QV2	105 aa	Predicted RBP	5.69	□□□□□ -1.5
UBA3-208	ENST00000465627	KRTAP5-3	Q6L8H2	238 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627		Q8NDZ9	215 aa		5.69	□□□□□ -1.5
UBA3-208	ENST00000465627		A0A087WTM6	91 aa		5.68	□□□□□ -1.5
UBA3-208	ENST00000465627	CARD19	Q96LW7	228 aa		5.68	□□□□□ -1.5
UBA3-208	ENST00000465627	SND1-IT1	Q9HBX3	110 aa		5.68	□□□□□ -1.5
UBA3-208	ENST00000465627	NDUFC2-KCTD14	E9PQ53	114 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	TAX1BP3	O14907	124 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	RTL8C	O15255	209 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	PSCA	O43653	123 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	INAFM2	P0DMQ5	153 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	RPL24	P83731	157 aa	Known RBP	5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	BATF	Q16520	125 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	C14orf177	Q52M58	125 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	C1orf134	Q5TEV5	83 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627		Q6ZRP5	223 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	VPS13B	Q7Z7G8	4022 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	IGKV2-28	A0A075B6P5	120 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627		A0A0B4J2C4	111 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627		K7ERJ3	54 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	IGKV2D-28	P01615	120 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	NPC2	P61916	151 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	COL5A1-AS1	Q5SY13	56 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627		Q8N814	137 aa		5.67	□□□□□ -1.5
UBA3-208	ENST00000465627	NHP2	Q9NX24	153 aa	Known RBP	5.67	□□□□□ -1.5
UBA3-208	ENST00000465627		A6NDN8	102 aa		5.66	□□□□□ -1.5
UBA3-208	ENST00000465627	NDUFC2	O95298	119 aa		5.66	□□□□□ -1.5
UBA3-208	ENST00000465627	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	C9orf129	Q5T035	196 aa	Known RBP	5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	KRTAP7-1	Q8IUC3	87 aa		5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	C9orf163	Q8N9P6	203 aa		5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	COPS9	Q8WXC6	57 aa		5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	FAT4	Q6V0I7	4981 aa		5.65	□□□□□ -1.51
UBA3-208	ENST00000465627	CDK2AP2	O75956	126 aa		5.64	□□□□□ -1.51
UBA3-208	ENST00000465627	LINC00336	Q6ZUF6	198 aa		5.64	□□□□□ -1.51
UBA3-208	ENST00000465627	LINC00337	Q8N6G1	96 aa		5.64	□□□□□ -1.51
UBA3-208	ENST00000465627	VPREB1	P12018	145 aa		5.63	□□□□□ -1.51
UBA3-208	ENST00000465627	SDIM1	Q6ZPB5	146 aa		5.63	□□□□□ -1.51
UBA3-208	ENST00000465627	XAGE1A	Q9HD64	81 aa		5.63	□□□□□ -1.51
UBA3-208	ENST00000465627	PRO1854	Q9UHT4	67 aa		5.63	□□□□□ -1.51
UBA3-208	ENST00000465627	PLA2G2D	Q9UNK4	145 aa		5.63	□□□□□ -1.51
UBA3-208	ENST00000465627	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.62	□□□□□ -1.51
UBA3-208	ENST00000465627	LOC107984640	A0A0U1RRK4	108 aa		5.62	□□□□□ -1.51
UBA3-208	ENST00000465627	C9orf118	A6NHY6	69 aa		5.62	□□□□□ -1.51
UBA3-208	ENST00000465627	TSPAN13	O95857	204 aa		5.62	□□□□□ -1.51

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