RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RYR3Q15413 4870 aa11.15□□□□□ -0.63
EXOSC3-203ENST00000465229 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
EXOSC3-203ENST00000465229 WFDC2Q14508 124 aa11.13□□□□□ -0.63
EXOSC3-203ENST00000465229 TRAV13-2A0A0B4J235 113 aa11.13□□□□□ -0.63
EXOSC3-203ENST00000465229 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
EXOSC3-203ENST00000465229 LECT2O14960 151 aa11.13□□□□□ -0.63
EXOSC3-203ENST00000465229 ATXN8Q156A1 80 aa11.13□□□□□ -0.63
EXOSC3-203ENST00000465229 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
EXOSC3-203ENST00000465229 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 M0QXV9 152 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 PFN2P35080 140 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 TNP2Q05952 138 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 C2orf82Q6UX34 121 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
EXOSC3-203ENST00000465229 A0A087WTM6 91 aa11.09□□□□□ -0.63
EXOSC3-203ENST00000465229 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
EXOSC3-203ENST00000465229 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
EXOSC3-203ENST00000465229 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
EXOSC3-203ENST00000465229 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
EXOSC3-203ENST00000465229 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
EXOSC3-203ENST00000465229 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
EXOSC3-203ENST00000465229 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
EXOSC3-203ENST00000465229 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 LST1O00453 97 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 LINC00336Q6ZUF6 198 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 MTURNQ8N3F0 131 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
EXOSC3-203ENST00000465229 DNAH11Q96DT5 4516 aa11.05□□□□□ -0.64
EXOSC3-203ENST00000465229 NDUFC2O95298 119 aa11.05□□□□□ -0.64
EXOSC3-203ENST00000465229 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
EXOSC3-203ENST00000465229 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
EXOSC3-203ENST00000465229 SLC25A20O43772 301 aa11.04□□□□□ -0.64
EXOSC3-203ENST00000465229 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
EXOSC3-203ENST00000465229 Q8N814 137 aa11.04□□□□□ -0.64
EXOSC3-203ENST00000465229 C9JAW5 83 aa11.03□□□□□ -0.64
EXOSC3-203ENST00000465229 J3QR89 54 aa11.03□□□□□ -0.64
EXOSC3-203ENST00000465229 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
EXOSC3-203ENST00000465229 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
EXOSC3-203ENST00000465229 TEN1Q86WV5 123 aa11.02□□□□□ -0.64
EXOSC3-203ENST00000465229 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
EXOSC3-203ENST00000465229 F8WDY8 70 aa11.02□□□□□ -0.65
EXOSC3-203ENST00000465229 SLPIP03973 132 aa11.02□□□□□ -0.65
EXOSC3-203ENST00000465229 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
EXOSC3-203ENST00000465229 PKD1P98161 4303 aa11.01□□□□□ -0.65
EXOSC3-203ENST00000465229 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
EXOSC3-203ENST00000465229 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
EXOSC3-203ENST00000465229 ANKRD29Q8N6D5 301 aa11□□□□□ -0.65
EXOSC3-203ENST00000465229 CLEC2BQ92478 149 aa11□□□□□ -0.65
EXOSC3-203ENST00000465229 C2orf48Q96LS8 159 aa11□□□□□ -0.65
EXOSC3-203ENST00000465229 H3BT86 120 aa10.99□□□□□ -0.65
EXOSC3-203ENST00000465229 C9orf116Q5BN46 136 aaPredicted RBP10.99□□□□□ -0.65
EXOSC3-203ENST00000465229 HECTD4Q9Y4D8 3996 aa10.98□□□□□ -0.65
EXOSC3-203ENST00000465229 TRACP01848 142 aa10.98□□□□□ -0.65
EXOSC3-203ENST00000465229 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
EXOSC3-203ENST00000465229 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 KRTAP10-2P60368 255 aa10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 SMIM11BQ8TCY0 68 aa10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 CAMK2N2Q96S95 79 aa10.97□□□□□ -0.65
EXOSC3-203ENST00000465229 H0YGX0 51 aa10.96□□□□□ -0.65
EXOSC3-203ENST00000465229 SYCNQ0VAF6 134 aa10.96□□□□□ -0.65
EXOSC3-203ENST00000465229 Q6ZRU5 148 aa10.96□□□□□ -0.65
EXOSC3-203ENST00000465229 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
EXOSC3-203ENST00000465229 VPS25Q9BRG1 176 aa10.95□□□□□ -0.66
EXOSC3-203ENST00000465229 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
EXOSC3-203ENST00000465229 CBY1Q9Y3M2 126 aa10.95□□□□□ -0.66
EXOSC3-203ENST00000465229 OR13C6PQ8NH95 151 aa10.94□□□□□ -0.66
EXOSC3-203ENST00000465229 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
EXOSC3-203ENST00000465229 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
EXOSC3-203ENST00000465229 DNAH5Q8TE73 4624 aa10.92□□□□□ -0.66
EXOSC3-203ENST00000465229 IGLV5-52A0A0A0MRZ9 124 aa10.91□□□□□ -0.66
EXOSC3-203ENST00000465229 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
EXOSC3-203ENST00000465229 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
EXOSC3-203ENST00000465229 Q8NDZ9 215 aa10.88□□□□□ -0.67
EXOSC3-203ENST00000465229 NDUFC2-KCTD14E9PQ53 114 aa10.87□□□□□ -0.67
EXOSC3-203ENST00000465229 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
EXOSC3-203ENST00000465229 A0A1B0GX51 115 aa10.87□□□□□ -0.67
EXOSC3-203ENST00000465229 SDIM1Q6ZPB5 146 aa10.86□□□□□ -0.67
EXOSC3-203ENST00000465229 IGLV6-57P01721 117 aa10.85□□□□□ -0.67
EXOSC3-203ENST00000465229 NCR3O14931 201 aa10.84□□□□□ -0.67
EXOSC3-203ENST00000465229 S100A7L2Q5SY68 101 aa10.84□□□□□ -0.67
EXOSC3-203ENST00000465229 DNAL4O96015 105 aa10.84□□□□□ -0.67
EXOSC3-203ENST00000465229 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
EXOSC3-203ENST00000465229 A0A087WYN8 130 aa10.83□□□□□ -0.68
EXOSC3-203ENST00000465229 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
EXOSC3-203ENST00000465229 TLX1NBP0CAT3 122 aa10.83□□□□□ -0.68
EXOSC3-203ENST00000465229 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
EXOSC3-203ENST00000465229 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
EXOSC3-203ENST00000465229 Q6ZRP5 223 aa10.82□□□□□ -0.68
EXOSC3-203ENST00000465229 XAGE1AQ9HD64 81 aa10.82□□□□□ -0.68
EXOSC3-203ENST00000465229 KRTAP10-1P60331 282 aa10.81□□□□□ -0.68
EXOSC3-203ENST00000465229 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
EXOSC3-203ENST00000465229 VPREB1P12018 145 aa10.8□□□□□ -0.68
EXOSC3-203ENST00000465229 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
EXOSC3-203ENST00000465229 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
EXOSC3-203ENST00000465229 C16orf90A8MZG2 172 aa10.8□□□□□ -0.68
EXOSC3-203ENST00000465229 A0A096LNI7 61 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms