RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 COL12A1Q99715 3063 aa-1.27□□□□□ -2.61
PTPN12-210ENST00000464313 C2orf88Q9BSF0 95 aa-1.27□□□□□ -2.61
PTPN12-210ENST00000464313 PRRC2CQ9Y520 2896 aaKnown RBP-1.27□□□□□ -2.61
PTPN12-210ENST00000464313 MAPKBP1O60336 1514 aa-1.28□□□□□ -2.61
PTPN12-210ENST00000464313 NBPF19A0A087WUL8 3843 aa-1.28□□□□□ -2.61
PTPN12-210ENST00000464313 KNDC1Q76NI1 1749 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 A0A0G2JND7 137 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 LINC00587B1AMM8 73 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 H3BQF6 201 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 GTF2H5Q6ZYL4 71 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 CHD1O14646 1710 aa-1.29□□□□□ -2.62
PTPN12-210ENST00000464313 SLIT1O75093 1534 aa-1.3□□□□□ -2.62
PTPN12-210ENST00000464313 H0Y9P7 68 aa-1.3□□□□□ -2.62
PTPN12-210ENST00000464313 SPRR2EP22531 72 aa-1.3□□□□□ -2.62
PTPN12-210ENST00000464313 TMEM203Q969S6 136 aa-1.3□□□□□ -2.62
PTPN12-210ENST00000464313 CACFD1Q9UGQ2 172 aa-1.3□□□□□ -2.62
PTPN12-210ENST00000464313 DNHD1Q96M86 4753 aa-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 GNGT1P63211 74 aa-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 C9orf62Q8N4C0 152 aa-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 ANKRD36A6QL64 1941 aa-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 TNRC18O15417 2968 aaPredicted RBP-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 EIF4G3O43432 1585 aaKnown RBP-1.31□□□□□ -2.62
PTPN12-210ENST00000464313 EDC4Q6P2E9 1401 aaKnown RBP-1.32□□□□□ -2.62
PTPN12-210ENST00000464313 AKAP13Q12802 2813 aa-1.32□□□□□ -2.62
PTPN12-210ENST00000464313 MRPS10P82664 201 aaKnown RBP-1.32□□□□□ -2.62
PTPN12-210ENST00000464313 ABCC5O15440 1437 aa-1.32□□□□□ -2.62
PTPN12-210ENST00000464313 DEFB112Q30KQ8 113 aa-1.33□□□□□ -2.62
PTPN12-210ENST00000464313 LELP1Q5T871 98 aa-1.33□□□□□ -2.62
PTPN12-210ENST00000464313 MRPL34Q9BQ48 92 aaKnown RBP-1.33□□□□□ -2.62
PTPN12-210ENST00000464313 CELSR3Q9NYQ7 3312 aa-1.33□□□□□ -2.62
PTPN12-210ENST00000464313 TOPAZ1Q8N9V7 1692 aa-1.33□□□□□ -2.62
PTPN12-210ENST00000464313 PSMG4Q5JS54 123 aa-1.34□□□□□ -2.62
PTPN12-210ENST00000464313 FAT3Q8TDW7 4589 aa-1.34□□□□□ -2.62
PTPN12-210ENST00000464313 COL6A5A8TX70 2615 aa-1.34□□□□□ -2.62
PTPN12-210ENST00000464313 TARBP1Q13395 1621 aaKnown RBP-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 TRBV25-1A0A075B6N4 114 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 GNGT2O14610 69 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 ARMS2P0C7Q2 107 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 PMCHL1Q16048 86 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 ABCA3Q99758 1704 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 DNAH6Q9C0G6 4158 aa-1.35□□□□□ -2.63
PTPN12-210ENST00000464313 MUC17Q685J3 4493 aa-1.36□□□□□ -2.63
PTPN12-210ENST00000464313 HEPN1Q6WQI6 88 aa-1.37□□□□□ -2.63
PTPN12-210ENST00000464313 TACC2O95359 2948 aa-1.37□□□□□ -2.63
PTPN12-210ENST00000464313 TRGV9Q99603 122 aa-1.38□□□□□ -2.63
PTPN12-210ENST00000464313 LRRC37AA6NMS7 1700 aa-1.39□□□□□ -2.63
PTPN12-210ENST00000464313 C20orf202A1L168 122 aa-1.39□□□□□ -2.63
PTPN12-210ENST00000464313 NDUFC1O43677 76 aa-1.39□□□□□ -2.63
PTPN12-210ENST00000464313 DNAH3Q8TD57 4116 aa-1.39□□□□□ -2.63
PTPN12-210ENST00000464313 MLH3Q9UHC1 1453 aa-1.39□□□□□ -2.63
PTPN12-210ENST00000464313 NBEAL2Q6ZNJ1 2754 aa-1.4□□□□□ -2.63
PTPN12-210ENST00000464313 REV3LO60673 3130 aa-1.41□□□□□ -2.63
PTPN12-210ENST00000464313 SHPRHQ149N8 1683 aa-1.41□□□□□ -2.63
PTPN12-210ENST00000464313 TRAV30A0A087WSZ9 112 aa-1.41□□□□□ -2.64
PTPN12-210ENST00000464313 H7BZZ5 65 aa-1.41□□□□□ -2.64
PTPN12-210ENST00000464313 KIAA1551Q9HCM1 1747 aa-1.41□□□□□ -2.64
PTPN12-210ENST00000464313 TRBV7-7A0A0K0K1E9 115 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 SPTY2D1-AS1A0A0U1RR47 76 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 CCL22O00626 93 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 UQCRHP07919 91 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 PKHD1L1Q86WI1 4243 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 NCOA3Q9Y6Q9 1424 aa-1.42□□□□□ -2.64
PTPN12-210ENST00000464313 ANKRD11Q6UB99 2663 aaPredicted RBP-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 MON2Q7Z3U7 1717 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 NBASA2RRP1 2371 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 TEX15Q9BXT5 2789 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 DNAH2Q9P225 4427 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 SARNPP82979 210 aaKnown RBP-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 WFDC13Q8IUB5 93 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 PMCHL2Q9BQD1 86 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 CDKN2A-AS1Q9UH64 79 aa-1.43□□□□□ -2.64
PTPN12-210ENST00000464313 KNL1Q8NG31 2342 aa-1.44□□□□□ -2.64
PTPN12-210ENST00000464313 CUX1P39880 1505 aa-1.44□□□□□ -2.64
PTPN12-210ENST00000464313 MT-ATP8P03928 68 aa-1.44□□□□□ -2.64
PTPN12-210ENST00000464313 COL14A1Q05707 1796 aaKnown RBP-1.44□□□□□ -2.64
PTPN12-210ENST00000464313 PRDM15P57071 1507 aaPredicted RBP-1.45□□□□□ -2.64
PTPN12-210ENST00000464313 HIGD1BQ9P298 99 aa-1.45□□□□□ -2.64
PTPN12-210ENST00000464313 PLECQ15149 4684 aaKnown RBP-1.46□□□□□ -2.64
PTPN12-210ENST00000464313 ZFYVE16Q7Z3T8 1539 aa-1.46□□□□□ -2.64
PTPN12-210ENST00000464313 FAM135AQ9P2D6 1515 aa-1.46□□□□□ -2.64
PTPN12-210ENST00000464313 CLIP1P30622 1438 aa-1.47□□□□□ -2.64
PTPN12-210ENST00000464313 NRXN1Q9ULB1 1477 aa-1.47□□□□□ -2.64
PTPN12-210ENST00000464313 MPC2O95563 127 aa-1.47□□□□□ -2.64
PTPN12-210ENST00000464313 ITPR1Q14643 2758 aa-1.47□□□□□ -2.65
PTPN12-210ENST00000464313 LAMA1P25391 3075 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 C5P01031 1676 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 PKD1P98161 4303 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 AP4S1Q9Y587 144 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 ADAMTS12P58397 1594 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 SAMD9Q5K651 1589 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 ANKRD36BQ8N2N9 1353 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 LAMA3Q16787 3333 aa-1.48□□□□□ -2.65
PTPN12-210ENST00000464313 LYSTQ99698 3801 aa-1.49□□□□□ -2.65
PTPN12-210ENST00000464313 TMEM218A2RU14 115 aa-1.49□□□□□ -2.65
PTPN12-210ENST00000464313 H0YGG7 62 aa-1.49□□□□□ -2.65
PTPN12-210ENST00000464313 PSENENQ9NZ42 101 aa-1.49□□□□□ -2.65
PTPN12-210ENST00000464313 PTPN23Q9H3S7 1636 aa-1.49□□□□□ -2.65
PTPN12-210ENST00000464313 RAPGEF2Q9Y4G8 1499 aa-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.5□□□□□ -2.65
PTPN12-210ENST00000464313 MGAM2Q2M2H8 2515 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms