RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 KRTAP10-3P60369 221 aa8.75□□□□□ -1.01
NUP58-206ENST00000463407 A0A096LNT2 108 aa8.74□□□□□ -1.01
NUP58-206ENST00000463407 Q6Q795 121 aa8.74□□□□□ -1.01
NUP58-206ENST00000463407 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
NUP58-206ENST00000463407 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
NUP58-206ENST00000463407 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
NUP58-206ENST00000463407 PLA2G1BP04054 148 aaKnown RBP8.73□□□□□ -1.01
NUP58-206ENST00000463407 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
NUP58-206ENST00000463407 SPINK1P00995 79 aa8.72□□□□□ -1.01
NUP58-206ENST00000463407 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
NUP58-206ENST00000463407 J3QL48 77 aa8.72□□□□□ -1.01
NUP58-206ENST00000463407 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
NUP58-206ENST00000463407 TLN2Q9Y4G6 2542 aa8.71□□□□□ -1.02
NUP58-206ENST00000463407 CRYGAP11844 174 aa8.71□□□□□ -1.02
NUP58-206ENST00000463407 USP9XQ93008 2570 aaPredicted RBP8.7□□□□□ -1.02
NUP58-206ENST00000463407 TRBV7-6A0A0J9YX20 115 aa8.7□□□□□ -1.02
NUP58-206ENST00000463407 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
NUP58-206ENST00000463407 H0Y9P7 68 aa8.7□□□□□ -1.02
NUP58-206ENST00000463407 RPL37AP61513 92 aaKnown RBP8.69□□□□□ -1.02
NUP58-206ENST00000463407 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
NUP58-206ENST00000463407 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
NUP58-206ENST00000463407 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
NUP58-206ENST00000463407 A6NED7 52 aa8.68□□□□□ -1.02
NUP58-206ENST00000463407 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
NUP58-206ENST00000463407 IGKV2D-30A0A075B6S6 120 aa8.67□□□□□ -1.02
NUP58-206ENST00000463407 IGKV2-30P06310 120 aa8.67□□□□□ -1.02
NUP58-206ENST00000463407 CSNK1G2-AS1Q8NCQ2 148 aa8.67□□□□□ -1.02
NUP58-206ENST00000463407 ELOF1P60002 83 aaKnown RBP8.67□□□□□ -1.02
NUP58-206ENST00000463407 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
NUP58-206ENST00000463407 DOPEY1Q5JWR5 2465 aa8.66□□□□□ -1.02
NUP58-206ENST00000463407 Q8NBF4 154 aa8.65□□□□□ -1.03
NUP58-206ENST00000463407 ANKRD17O75179 2603 aaKnown RBP8.65□□□□□ -1.03
NUP58-206ENST00000463407 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
NUP58-206ENST00000463407 Q6ZRX8 168 aa8.64□□□□□ -1.03
NUP58-206ENST00000463407 BCE1O60756 84 aa8.64□□□□□ -1.03
NUP58-206ENST00000463407 CXCL6P80162 114 aa8.63□□□□□ -1.03
NUP58-206ENST00000463407 A0A0U1RQV1 116 aa8.63□□□□□ -1.03
NUP58-206ENST00000463407 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
NUP58-206ENST00000463407 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
NUP58-206ENST00000463407 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
NUP58-206ENST00000463407 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
NUP58-206ENST00000463407 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
NUP58-206ENST00000463407 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
NUP58-206ENST00000463407 SMIM29Q86T20 159 aa8.59□□□□□ -1.03
NUP58-206ENST00000463407 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
NUP58-206ENST00000463407 USP9YO00507 2555 aaPredicted RBP8.58□□□□□ -1.04
NUP58-206ENST00000463407 LINC00313P59037 77 aa8.58□□□□□ -1.04
NUP58-206ENST00000463407 FASNP49327 2511 aaKnown RBP8.58□□□□□ -1.04
NUP58-206ENST00000463407 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
NUP58-206ENST00000463407 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
NUP58-206ENST00000463407 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
NUP58-206ENST00000463407 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
NUP58-206ENST00000463407 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
NUP58-206ENST00000463407 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
NUP58-206ENST00000463407 UTRNP46939 3433 aa8.55□□□□□ -1.04
NUP58-206ENST00000463407 SERTAD4-AS1Q5TG53 156 aa8.55□□□□□ -1.04
NUP58-206ENST00000463407 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
NUP58-206ENST00000463407 Q96NJ1 140 aa8.54□□□□□ -1.04
NUP58-206ENST00000463407 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
NUP58-206ENST00000463407 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
NUP58-206ENST00000463407 POLQO75417 2590 aa8.54□□□□□ -1.04
NUP58-206ENST00000463407 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
NUP58-206ENST00000463407 Q6ZQT0 140 aa8.54□□□□□ -1.04
NUP58-206ENST00000463407 A0A087WTM6 91 aa8.53□□□□□ -1.04
NUP58-206ENST00000463407 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
NUP58-206ENST00000463407 VPREB1P12018 145 aa8.53□□□□□ -1.04
NUP58-206ENST00000463407 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
NUP58-206ENST00000463407 SETD2Q9BYW2 2564 aaPredicted RBP8.52□□□□□ -1.05
NUP58-206ENST00000463407 LITAFQ99732 161 aa8.52□□□□□ -1.05
NUP58-206ENST00000463407 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.05
NUP58-206ENST00000463407 LOC110117498A0A087WWA1 95 aa8.51□□□□□ -1.05
NUP58-206ENST00000463407 ACANP16112 2415 aa8.51□□□□□ -1.05
NUP58-206ENST00000463407 A0A1B0GW54 56 aa8.51□□□□□ -1.05
NUP58-206ENST00000463407 IGLV6-57P01721 117 aa8.5□□□□□ -1.05
NUP58-206ENST00000463407 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
NUP58-206ENST00000463407 F8P00451 2351 aa8.5□□□□□ -1.05
NUP58-206ENST00000463407 LINC00336Q6ZUF6 198 aa8.5□□□□□ -1.05
NUP58-206ENST00000463407 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
NUP58-206ENST00000463407 MTORP42345 2549 aa8.49□□□□□ -1.05
NUP58-206ENST00000463407 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
NUP58-206ENST00000463407 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
NUP58-206ENST00000463407 PSPHP1O15172 72 aa8.47□□□□□ -1.05
NUP58-206ENST00000463407 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
NUP58-206ENST00000463407 MUC4Q99102 2169 aa8.46□□□□□ -1.05
NUP58-206ENST00000463407 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
NUP58-206ENST00000463407 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
NUP58-206ENST00000463407 ZNF861PO60384 105 aa8.43□□□□□ -1.06
NUP58-206ENST00000463407 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
NUP58-206ENST00000463407 ACYP2P14621 99 aa8.43□□□□□ -1.06
NUP58-206ENST00000463407 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
NUP58-206ENST00000463407 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
NUP58-206ENST00000463407 TRBV7-4A0A0J9YYF1 115 aa8.41□□□□□ -1.06
NUP58-206ENST00000463407 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
NUP58-206ENST00000463407 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
NUP58-206ENST00000463407 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
NUP58-206ENST00000463407 CASC10Q5T4H9 136 aa8.39□□□□□ -1.07
NUP58-206ENST00000463407 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
NUP58-206ENST00000463407 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
NUP58-206ENST00000463407 EPG5Q9HCE0 2579 aa8.38□□□□□ -1.07
NUP58-206ENST00000463407 A0A1B0GU69 56 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms