RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 APLNQ9ULZ1 77 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 FMN2Q9NZ56 1722 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 MAP3K4Q9Y6R4 1608 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 GOLGA4Q13439 2230 aaKnown RBP0.37□□□□□ -2.35
GPNMB-205ENST00000463011 USF3Q68DE3 2245 aa0.37□□□□□ -2.35
GPNMB-205ENST00000463011 PLCE1Q9P212 2302 aa0.36□□□□□ -2.35
GPNMB-205ENST00000463011 LRRC7Q96NW7 1537 aa0.36□□□□□ -2.35
GPNMB-205ENST00000463011 SSPOA2VEC9 5147 aa0.36□□□□□ -2.35
GPNMB-205ENST00000463011 TMEM131LA2VDJ0 1609 aa0.35□□□□□ -2.35
GPNMB-205ENST00000463011 CEBPZOSA8MTT3 80 aa0.35□□□□□ -2.35
GPNMB-205ENST00000463011 ZFYVE26Q68DK2 2539 aa0.35□□□□□ -2.35
GPNMB-205ENST00000463011 PKD1L3Q7Z443 1732 aa0.35□□□□□ -2.35
GPNMB-205ENST00000463011 MAGI2Q86UL8 1455 aa0.35□□□□□ -2.35
GPNMB-205ENST00000463011 KANTRA0A1W2PQU2 76 aa0.34□□□□□ -2.36
GPNMB-205ENST00000463011 ACYP1P07311 99 aa0.34□□□□□ -2.36
GPNMB-205ENST00000463011 PPLO60437 1756 aa0.34□□□□□ -2.36
GPNMB-205ENST00000463011 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
GPNMB-205ENST00000463011 SPINK4O60575 86 aa0.33□□□□□ -2.36
GPNMB-205ENST00000463011 COX7BP24311 80 aa0.33□□□□□ -2.36
GPNMB-205ENST00000463011 GAFA1Q96PS6 74 aa0.33□□□□□ -2.36
GPNMB-205ENST00000463011 S100A13Q99584 98 aa0.33□□□□□ -2.36
GPNMB-205ENST00000463011 MRPL34Q9BQ48 92 aaKnown RBP0.33□□□□□ -2.36
GPNMB-205ENST00000463011 ADIRFQ15847 76 aa0.32□□□□□ -2.36
GPNMB-205ENST00000463011 ST20Q9HBF5 79 aa0.32□□□□□ -2.36
GPNMB-205ENST00000463011 ANKRD36A6QL64 1941 aa0.31□□□□□ -2.36
GPNMB-205ENST00000463011 TRAV21A0A0B4J279 112 aa0.31□□□□□ -2.36
GPNMB-205ENST00000463011 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
GPNMB-205ENST00000463011 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
GPNMB-205ENST00000463011 RGPD1P0DJD0 1748 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 LRRC9Q6ZRR7 1453 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 ARHGAP35Q9NRY4 1499 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 RGPD2P0DJD1 1756 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
GPNMB-205ENST00000463011 H1FX-AS1Q4G0G2 97 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 WFDC9Q8NEX5 89 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 ANK2Q01484 3957 aa0.3□□□□□ -2.36
GPNMB-205ENST00000463011 DIP2BQ9P265 1576 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 ZNF292O60281 2723 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 CHD9Q3L8U1 2897 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 SUPT6HQ7KZ85 1726 aaKnown RBP0.29□□□□□ -2.36
GPNMB-205ENST00000463011 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
GPNMB-205ENST00000463011 KIF20BQ96Q89 1820 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 URB1O60287 2271 aaKnown RBP0.29□□□□□ -2.36
GPNMB-205ENST00000463011 ERVK-7P63135 1459 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 AKAP6Q13023 2319 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 PTPRQQ9UMZ3 2332 aa0.29□□□□□ -2.36
GPNMB-205ENST00000463011 IGF2RP11717 2491 aa0.28□□□□□ -2.36
GPNMB-205ENST00000463011 CCL22O00626 93 aa0.28□□□□□ -2.36
GPNMB-205ENST00000463011 HEPN1Q6WQI6 88 aa0.28□□□□□ -2.36
GPNMB-205ENST00000463011 CLIP1P30622 1438 aa0.28□□□□□ -2.37
GPNMB-205ENST00000463011 DCAF1Q9Y4B6 1507 aa0.28□□□□□ -2.37
GPNMB-205ENST00000463011 PIEZO2Q9H5I5 2752 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 RPL38P63173 70 aaKnown RBP0.27□□□□□ -2.37
GPNMB-205ENST00000463011 PKDREJQ9NTG1 2253 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.27□□□□□ -2.37
GPNMB-205ENST00000463011 USP32Q8NFA0 1604 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
GPNMB-205ENST00000463011 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
GPNMB-205ENST00000463011 PRM1P04553 51 aa0.26□□□□□ -2.37
GPNMB-205ENST00000463011 LELP1Q5T871 98 aa0.26□□□□□ -2.37
GPNMB-205ENST00000463011 URB2Q14146 1524 aaKnown RBP0.26□□□□□ -2.37
GPNMB-205ENST00000463011 COL14A1Q05707 1796 aaKnown RBP0.26□□□□□ -2.37
GPNMB-205ENST00000463011 NCOA2Q15596 1464 aa0.25□□□□□ -2.37
GPNMB-205ENST00000463011 H3BUT2 72 aa0.25□□□□□ -2.37
GPNMB-205ENST00000463011 SPTBN1Q01082 2364 aaKnown RBP0.25□□□□□ -2.37
GPNMB-205ENST00000463011 NDUFB1O75438 58 aa0.24□□□□□ -2.37
GPNMB-205ENST00000463011 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
GPNMB-205ENST00000463011 ZNF831Q5JPB2 1677 aa0.24□□□□□ -2.37
GPNMB-205ENST00000463011 PREX1Q8TCU6 1659 aa0.24□□□□□ -2.37
GPNMB-205ENST00000463011 SCRIBQ14160 1630 aa0.24□□□□□ -2.37
GPNMB-205ENST00000463011 OTOGQ6ZRI0 2925 aa0.23□□□□□ -2.37
GPNMB-205ENST00000463011 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
GPNMB-205ENST00000463011 BVES-AS1Q5T3Y7 98 aa0.23□□□□□ -2.37
GPNMB-205ENST00000463011 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
GPNMB-205ENST00000463011 ANKHD1Q8IWZ3 2542 aaKnown RBP0.23□□□□□ -2.37
GPNMB-205ENST00000463011 CSMD3Q7Z407 3707 aa0.23□□□□□ -2.37
GPNMB-205ENST00000463011 BCORQ6W2J9 1755 aa0.22□□□□□ -2.37
GPNMB-205ENST00000463011 CDKN2A-AS1Q9UH64 79 aa0.22□□□□□ -2.37
GPNMB-205ENST00000463011 PIK3C2BO00750 1634 aa0.22□□□□□ -2.37
GPNMB-205ENST00000463011 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
GPNMB-205ENST00000463011 KDM5DQ9BY66 1539 aa0.22□□□□□ -2.37
GPNMB-205ENST00000463011 POLR1AO95602 1720 aaPredicted RBP0.21□□□□□ -2.38
GPNMB-205ENST00000463011 HIVEP3Q5T1R4 2406 aa0.21□□□□□ -2.38
GPNMB-205ENST00000463011 CEP170BQ9Y4F5 1589 aaPredicted RBP0.2□□□□□ -2.38
GPNMB-205ENST00000463011 ATP5EP2Q5VTU8 51 aa0.2□□□□□ -2.38
GPNMB-205ENST00000463011 GVINP1Q7Z2Y8 2422 aa0.2□□□□□ -2.38
GPNMB-205ENST00000463011 TENM4Q6N022 2769 aa0.19□□□□□ -2.38
GPNMB-205ENST00000463011 MAGI3Q5TCQ9 1506 aa0.19□□□□□ -2.38
GPNMB-205ENST00000463011 WFDC13Q8IUB5 93 aa0.19□□□□□ -2.38
GPNMB-205ENST00000463011 LTN1O94822 1766 aa0.19□□□□□ -2.38
GPNMB-205ENST00000463011 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 ABCC1P33527 1531 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 A0A087WXM4 84 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 UMAD1C9J7I0 102 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 IFI6P09912 130 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 DEFB121Q5J5C9 76 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 RRBP1Q9P2E9 1410 aaKnown RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms