RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 LEPROTO15243 131 aa12.21□□□□□ -0.45
HLA-F-222ENST00000462777 IGKV2D-26A0A0A0MRZ7 120 aa12.2□□□□□ -0.46
HLA-F-222ENST00000462777 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
HLA-F-222ENST00000462777 LINC01561Q8N1V8 128 aa12.2□□□□□ -0.46
HLA-F-222ENST00000462777 F8WDY8 70 aa12.19□□□□□ -0.46
HLA-F-222ENST00000462777 DIRC1Q969H9 104 aa12.19□□□□□ -0.46
HLA-F-222ENST00000462777 CDKN2A-AS1Q9UH64 79 aa12.18□□□□□ -0.46
HLA-F-222ENST00000462777 A0A087WZ39 114 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 IGLV5-39A0A0G2JS06 123 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 J3QQQ9 107 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 LGALS3P17931 250 aaKnown RBP12.16□□□□□ -0.46
HLA-F-222ENST00000462777 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 ORAOV1Q8WV07 137 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
HLA-F-222ENST00000462777 IGHV3OR16-9A0A0B4J2B5 98 aa12.15□□□□□ -0.46
HLA-F-222ENST00000462777 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.46
HLA-F-222ENST00000462777 NDUFA1O15239 70 aa12.15□□□□□ -0.46
HLA-F-222ENST00000462777 IGLV7-43P04211 117 aa12.15□□□□□ -0.46
HLA-F-222ENST00000462777 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
HLA-F-222ENST00000462777 PRR26Q8N8Z3 221 aa12.13□□□□□ -0.47
HLA-F-222ENST00000462777 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
HLA-F-222ENST00000462777 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
HLA-F-222ENST00000462777 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
HLA-F-222ENST00000462777 SFTA2Q6UW10 78 aa12.11□□□□□ -0.47
HLA-F-222ENST00000462777 C2orf91Q6ZV80 131 aa12.11□□□□□ -0.47
HLA-F-222ENST00000462777 H0Y9J4 135 aa12.1□□□□□ -0.47
HLA-F-222ENST00000462777 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
HLA-F-222ENST00000462777 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
HLA-F-222ENST00000462777 GAGE2EQ4V326 116 aa12.09□□□□□ -0.47
HLA-F-222ENST00000462777 GAGE2DQ9UEU5 116 aa12.09□□□□□ -0.47
HLA-F-222ENST00000462777 IGLV1-50A0A075B6I6 118 aa12.08□□□□□ -0.48
HLA-F-222ENST00000462777 M0R143 59 aa12.08□□□□□ -0.48
HLA-F-222ENST00000462777 CTAG1AP78358 180 aa12.08□□□□□ -0.48
HLA-F-222ENST00000462777 TAL2Q16559 108 aa12.08□□□□□ -0.48
HLA-F-222ENST00000462777 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.48
HLA-F-222ENST00000462777 TTTY13Q9BZ97 58 aa12.08□□□□□ -0.48
HLA-F-222ENST00000462777 FAM168BA1KXE4 195 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 HSD52Q0P140 79 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 C10orf25Q5T742 122 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 SCGB1D4Q6XE38 83 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
HLA-F-222ENST00000462777 HERV-K104P63124 156 aa12.06□□□□□ -0.48
HLA-F-222ENST00000462777 UBE2BP63146 152 aa12.06□□□□□ -0.48
HLA-F-222ENST00000462777 C6orf48Q9UBA6 75 aa12.06□□□□□ -0.48
HLA-F-222ENST00000462777 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
HLA-F-222ENST00000462777 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
HLA-F-222ENST00000462777 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
HLA-F-222ENST00000462777 Q8IZM0 81 aa12.04□□□□□ -0.48
HLA-F-222ENST00000462777 SPANXB1Q9NS25 103 aaPredicted RBP12.04□□□□□ -0.48
HLA-F-222ENST00000462777 M0QXV9 152 aa12.03□□□□□ -0.48
HLA-F-222ENST00000462777 TIMM17BO60830 172 aa12.03□□□□□ -0.48
HLA-F-222ENST00000462777 CXCL5P42830 114 aa12.03□□□□□ -0.48
HLA-F-222ENST00000462777 LPAP08519 4548 aa12.02□□□□□ -0.48
HLA-F-222ENST00000462777 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.49
HLA-F-222ENST00000462777 TMEM238C9JI98 176 aa12.02□□□□□ -0.49
HLA-F-222ENST00000462777 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
HLA-F-222ENST00000462777 KRTAP11-1Q8IUC1 163 aa12.02□□□□□ -0.49
HLA-F-222ENST00000462777 Q6ZVH6 145 aa12.01□□□□□ -0.49
HLA-F-222ENST00000462777 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-222ENST00000462777 A0A0J9YXY3 114 aa12□□□□□ -0.49
HLA-F-222ENST00000462777 PRSS2P07478 247 aa12□□□□□ -0.49
HLA-F-222ENST00000462777 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
HLA-F-222ENST00000462777 KIAA0087Q14695 138 aa11.99□□□□□ -0.49
HLA-F-222ENST00000462777 PRR4Q16378 134 aa11.99□□□□□ -0.49
HLA-F-222ENST00000462777 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
HLA-F-222ENST00000462777 HIST1H4GQ99525 98 aa11.98□□□□□ -0.49
HLA-F-222ENST00000462777 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
HLA-F-222ENST00000462777 C6orf226Q5I0X4 101 aa11.97□□□□□ -0.49
HLA-F-222ENST00000462777 BVES-AS1Q5T3Y7 98 aa11.97□□□□□ -0.49
HLA-F-222ENST00000462777 TOMM7Q9P0U1 55 aa11.97□□□□□ -0.49
HLA-F-222ENST00000462777 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-222ENST00000462777 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
HLA-F-222ENST00000462777 KRTAP7-1Q8IUC3 87 aa11.96□□□□□ -0.49
HLA-F-222ENST00000462777 COPS9Q8WXC6 57 aa11.96□□□□□ -0.49
HLA-F-222ENST00000462777 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
HLA-F-222ENST00000462777 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
HLA-F-222ENST00000462777 CEND1Q8N111 149 aa11.95□□□□□ -0.5
HLA-F-222ENST00000462777 PPDPFQ9H3Y8 114 aa11.95□□□□□ -0.5
HLA-F-222ENST00000462777 TMEM238LA0A1B0GVL6 79 aa11.94□□□□□ -0.5
HLA-F-222ENST00000462777 A6NJY4 79 aa11.94□□□□□ -0.5
HLA-F-222ENST00000462777 C9orf129Q5T035 196 aaKnown RBP11.94□□□□□ -0.5
HLA-F-222ENST00000462777 A6NDN8 102 aa11.93□□□□□ -0.5
HLA-F-222ENST00000462777 IFITM1P13164 125 aa11.93□□□□□ -0.5
HLA-F-222ENST00000462777 CKS1BP61024 79 aa11.93□□□□□ -0.5
HLA-F-222ENST00000462777 COL5A1-AS1Q5SY13 56 aa11.93□□□□□ -0.5
HLA-F-222ENST00000462777 LITAFQ99732 161 aa11.93□□□□□ -0.5
HLA-F-222ENST00000462777 ZNF861PO60384 105 aa11.92□□□□□ -0.5
HLA-F-222ENST00000462777 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
HLA-F-222ENST00000462777 BATFQ16520 125 aa11.91□□□□□ -0.5
HLA-F-222ENST00000462777 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
HLA-F-222ENST00000462777 RPL24P83731 157 aaKnown RBP11.89□□□□□ -0.51
HLA-F-222ENST00000462777 COX17Q14061 63 aa11.89□□□□□ -0.51
HLA-F-222ENST00000462777 C22orf24Q9Y442 160 aa11.88□□□□□ -0.51
HLA-F-222ENST00000462777 FXYD2P54710 66 aa11.87□□□□□ -0.51
HLA-F-222ENST00000462777 ERG28Q9UKR5 140 aa11.87□□□□□ -0.51
HLA-F-222ENST00000462777 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
HLA-F-222ENST00000462777 XAGE1AQ9HD64 81 aa11.85□□□□□ -0.51
HLA-F-222ENST00000462777 TSPAN13O95857 204 aa11.84□□□□□ -0.51
HLA-F-222ENST00000462777 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms