RNA–Protein interactions for RNA: ENST00000462657.1

ANKRD28-207, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-207ENST00000462657 SPTY2D1-AS1A0A0U1RR47 76 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 LINC00959A0A1B0GUT2 108 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 LINC01546A6NGU7 62 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 SPINK13Q1W4C9 94 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 CDC42BPAQ5VT25 1732 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 RREB1Q92766 1687 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 ALPK2Q86TB3 2170 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 SAMD9LQ8IVG5 1584 aa1.51□□□□□ -2.17
ANKRD28-207ENST00000462657 ATP7AQ04656 1500 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 TNRC6BQ9UPQ9 1833 aaKnown RBP1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 POLR1AO95602 1720 aaPredicted RBP1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 RICTORQ6R327 1708 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 FMN2Q9NZ56 1722 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 COX6B1P14854 86 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 IGFL1Q6UW32 110 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 KCNQ1DNQ9H478 68 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 TULP4Q9NRJ4 1543 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 SDK1Q7Z5N4 2213 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 ARFGEF1Q9Y6D6 1849 aa1.5□□□□□ -2.17
ANKRD28-207ENST00000462657 SCN7AQ01118 1682 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 CPSF4LA6NMK7 179 aaKnown RBP1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 KRTAP13-2Q52LG2 175 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 C10orf99Q6UWK7 81 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 COL27A1Q8IZC6 1860 aaPredicted RBP1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 TJP1Q07157 1748 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 PKD1L3Q7Z443 1732 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 TIAM2Q8IVF5 1701 aa1.49□□□□□ -2.17
ANKRD28-207ENST00000462657 C3P01024 1663 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 C5P01031 1676 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 FAM208AQ9UK61 1670 aaKnown RBP1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 UBE2DNLQ8IWF7 75 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 ANKRD36CQ5JPF3 1778 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 PCDH15Q96QU1 1955 aa1.48□□□□□ -2.17
ANKRD28-207ENST00000462657 CEP192Q8TEP8 1941 aa1.47□□□□□ -2.17
ANKRD28-207ENST00000462657 DEFB131BA0A096LNP1 70 aa1.47□□□□□ -2.17
ANKRD28-207ENST00000462657 GVQW2A0A096LPI5 108 aaPredicted RBP1.47□□□□□ -2.17
ANKRD28-207ENST00000462657 ANKRD36A6QL64 1941 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 SLIT1O75093 1534 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 COL4A1P02462 1669 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 LY6G6CO95867 125 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 Q6ZRN7 208 aaPredicted RBP1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 KRTAP13-1Q8IUC0 172 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 BRWD1Q9NSI6 2320 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 LRRC37A2A6NM11 1700 aa1.46□□□□□ -2.18
ANKRD28-207ENST00000462657 COL4A5P29400 1685 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 DEPDC5O75140 1603 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 LINC00158P58513 81 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 LINC00575Q6W349 94 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 USMG5Q96IX5 58 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 FREM1Q5H8C1 2179 aa1.45□□□□□ -2.18
ANKRD28-207ENST00000462657 NRXN3Q9Y4C0 1643 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 ZFHX2Q9C0A1 2572 aaPredicted RBP1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 A0A096LNT2 108 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 G3V318 75 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 IQGAP1P46940 1657 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 BCORQ6W2J9 1755 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 PAPPA2Q9BXP8 1791 aa1.44□□□□□ -2.18
ANKRD28-207ENST00000462657 PRB1P04280 392 aa1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 CRIP1P50238 77 aa1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 UNQ6190/PRO20217Q6UXQ8 127 aa1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 COL14A1Q05707 1796 aaKnown RBP1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 LY75O60449 1722 aa1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 NCOA6Q14686 2063 aaPredicted RBP1.43□□□□□ -2.18
ANKRD28-207ENST00000462657 TNCP24821 2201 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 PIGYQ3MUY2 71 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 Q8IZM0 81 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 SMIM2Q9BVW6 85 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 CDKN2A-AS1Q9UH64 79 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 COL4A2P08572 1712 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 PARP4Q9UKK3 1724 aaKnown RBP1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 E9PCH4 1651 aa1.42□□□□□ -2.18
ANKRD28-207ENST00000462657 NRAPQ86VF7 1730 aa1.41□□□□□ -2.18
ANKRD28-207ENST00000462657 ZNF831Q5JPB2 1677 aa1.41□□□□□ -2.18
ANKRD28-207ENST00000462657 GCC2Q8IWJ2 1684 aa1.41□□□□□ -2.18
ANKRD28-207ENST00000462657 CLTCL1P53675 1640 aa1.4□□□□□ -2.18
ANKRD28-207ENST00000462657 DOT1LQ8TEK3 1739 aa1.4□□□□□ -2.18
ANKRD28-207ENST00000462657 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
ANKRD28-207ENST00000462657 SHANK1Q9Y566 2161 aa1.4□□□□□ -2.19
ANKRD28-207ENST00000462657 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
ANKRD28-207ENST00000462657 MED13LQ71F56 2210 aa1.4□□□□□ -2.19
ANKRD28-207ENST00000462657 A0A0G2JMZ2 1700 aa1.4□□□□□ -2.19
ANKRD28-207ENST00000462657 GPR179Q6PRD1 2367 aa1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 CCL22O00626 93 aa1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 MINOS1Q5TGZ0 78 aa1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 DDX60LQ5H9U9 1706 aaKnown RBP1.39□□□□□ -2.19
ANKRD28-207ENST00000462657 LRRC37AA6NMS7 1700 aa1.38□□□□□ -2.19
ANKRD28-207ENST00000462657 DDX60Q8IY21 1712 aaKnown RBP1.38□□□□□ -2.19
ANKRD28-207ENST00000462657 NDUFA1O15239 70 aa1.38□□□□□ -2.19
ANKRD28-207ENST00000462657 PRO3102Q9H379 93 aa1.38□□□□□ -2.19
ANKRD28-207ENST00000462657 FBN1P35555 2871 aaKnown RBP1.38□□□□□ -2.19
ANKRD28-207ENST00000462657 QSER1Q2KHR3 1735 aa1.37□□□□□ -2.19
ANKRD28-207ENST00000462657 K7EQZ3 153 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms