RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
SF3A3-203ENST00000461869 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
SF3A3-203ENST00000461869 LITAFQ99732 161 aa10.06□□□□□ -0.8
SF3A3-203ENST00000461869 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 A6NJY4 79 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 IFITM1P13164 125 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 CEND1Q8N111 149 aa10.05□□□□□ -0.8
SF3A3-203ENST00000461869 LINC00158P58513 81 aa10.04□□□□□ -0.8
SF3A3-203ENST00000461869 PPDPFQ9H3Y8 114 aa10.04□□□□□ -0.8
SF3A3-203ENST00000461869 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 HINT1P49773 126 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-203ENST00000461869 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
SF3A3-203ENST00000461869 OXTP01178 125 aa10.02□□□□□ -0.81
SF3A3-203ENST00000461869 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
SF3A3-203ENST00000461869 RPL24P83731 157 aaKnown RBP10.02□□□□□ -0.81
SF3A3-203ENST00000461869 CARD19Q96LW7 228 aa10.02□□□□□ -0.81
SF3A3-203ENST00000461869 PFN2P35080 140 aa10.01□□□□□ -0.81
SF3A3-203ENST00000461869 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-203ENST00000461869 BATFQ16520 125 aa10.01□□□□□ -0.81
SF3A3-203ENST00000461869 RNF151Q2KHN1 245 aa10.01□□□□□ -0.81
SF3A3-203ENST00000461869 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
SF3A3-203ENST00000461869 PLA2G2DQ9UNK4 145 aa10.01□□□□□ -0.81
SF3A3-203ENST00000461869 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 A0A0U1RRA0 63 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 A6NDN8 102 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 C10orf25Q5T742 122 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 Q6ZRU5 148 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
SF3A3-203ENST00000461869 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-203ENST00000461869 FXYD2P54710 66 aa9.98□□□□□ -0.81
SF3A3-203ENST00000461869 LBHQ53QV2 105 aaPredicted RBP9.98□□□□□ -0.81
SF3A3-203ENST00000461869 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
SF3A3-203ENST00000461869 DAND5Q8N907 189 aa9.98□□□□□ -0.81
SF3A3-203ENST00000461869 CIRBP-AS1Q8TBR5 109 aa9.98□□□□□ -0.81
SF3A3-203ENST00000461869 LINC00308Q8TCZ7 52 aa9.98□□□□□ -0.81
SF3A3-203ENST00000461869 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
SF3A3-203ENST00000461869 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
SF3A3-203ENST00000461869 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
SF3A3-203ENST00000461869 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-203ENST00000461869 LRP1Q07954 4544 aaKnown RBP9.96□□□□□ -0.82
SF3A3-203ENST00000461869 NPC2P61916 151 aa9.95□□□□□ -0.82
SF3A3-203ENST00000461869 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
SF3A3-203ENST00000461869 A4D1N5 150 aa9.94□□□□□ -0.82
SF3A3-203ENST00000461869 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
SF3A3-203ENST00000461869 NHP2Q9NX24 153 aaKnown RBP9.94□□□□□ -0.82
SF3A3-203ENST00000461869 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
SF3A3-203ENST00000461869 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
SF3A3-203ENST00000461869 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
SF3A3-203ENST00000461869 A0A0B4J2C4 111 aa9.92□□□□□ -0.82
SF3A3-203ENST00000461869 A0A1B0GWB2 263 aa9.92□□□□□ -0.82
SF3A3-203ENST00000461869 SLPIP03973 132 aa9.92□□□□□ -0.82
SF3A3-203ENST00000461869 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
SF3A3-203ENST00000461869 LOC107984640A0A0U1RRK4 108 aa9.91□□□□□ -0.82
SF3A3-203ENST00000461869 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
SF3A3-203ENST00000461869 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.82
SF3A3-203ENST00000461869 NDUFC2O95298 119 aa9.9□□□□□ -0.82
SF3A3-203ENST00000461869 RAB37Q96AX2 223 aa9.9□□□□□ -0.82
SF3A3-203ENST00000461869 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
SF3A3-203ENST00000461869 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-203ENST00000461869 CFC1BP0CG36 223 aa9.88□□□□□ -0.83
SF3A3-203ENST00000461869 CFC1P0CG37 223 aa9.88□□□□□ -0.83
SF3A3-203ENST00000461869 Q6ZRP5 223 aa9.87□□□□□ -0.83
SF3A3-203ENST00000461869 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
SF3A3-203ENST00000461869 TRAV13-2A0A0B4J235 113 aa9.86□□□□□ -0.83
SF3A3-203ENST00000461869 K7ERJ3 54 aa9.86□□□□□ -0.83
SF3A3-203ENST00000461869 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
SF3A3-203ENST00000461869 C9orf163Q8N9P6 203 aa9.86□□□□□ -0.83
SF3A3-203ENST00000461869 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
SF3A3-203ENST00000461869 XAGE1AQ9HD64 81 aa9.85□□□□□ -0.83
SF3A3-203ENST00000461869 TRBV10-2A0A0K0K1G8 114 aa9.83□□□□□ -0.84
SF3A3-203ENST00000461869 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
SF3A3-203ENST00000461869 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
SF3A3-203ENST00000461869 PKHD1L1Q86WI1 4243 aa9.83□□□□□ -0.84
SF3A3-203ENST00000461869 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
SF3A3-203ENST00000461869 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
SF3A3-203ENST00000461869 IGKV2-28A0A075B6P5 120 aa9.81□□□□□ -0.84
SF3A3-203ENST00000461869 IGKV2D-28P01615 120 aa9.81□□□□□ -0.84
SF3A3-203ENST00000461869 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
SF3A3-203ENST00000461869 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
SF3A3-203ENST00000461869 VPREB1P12018 145 aa9.8□□□□□ -0.84
SF3A3-203ENST00000461869 Q1RN00 199 aa9.8□□□□□ -0.84
SF3A3-203ENST00000461869 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
SF3A3-203ENST00000461869 TSPAN13O95857 204 aa9.79□□□□□ -0.84
SF3A3-203ENST00000461869 LYRM7Q5U5X0 104 aa9.79□□□□□ -0.84
SF3A3-203ENST00000461869 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
SF3A3-203ENST00000461869 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
SF3A3-203ENST00000461869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-203ENST00000461869 A0A096LNI7 61 aa9.78□□□□□ -0.84
SF3A3-203ENST00000461869 NCR3O14931 201 aa9.78□□□□□ -0.84
SF3A3-203ENST00000461869 S100A7L2Q5SY68 101 aa9.78□□□□□ -0.84
SF3A3-203ENST00000461869 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
SF3A3-203ENST00000461869 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms