RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TRAPPC1Q9Y5R8 145 aa10.35□□□□□ -0.75
SSB-206ENST00000461708 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
SSB-206ENST00000461708 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
SSB-206ENST00000461708 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
SSB-206ENST00000461708 Q8NDZ9 215 aa10.33□□□□□ -0.76
SSB-206ENST00000461708 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
SSB-206ENST00000461708 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
SSB-206ENST00000461708 PMCHL1Q16048 86 aa10.31□□□□□ -0.76
SSB-206ENST00000461708 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
SSB-206ENST00000461708 LINC00158P58513 81 aa10.29□□□□□ -0.76
SSB-206ENST00000461708 SPAG11AQ6PDA7 123 aa10.29□□□□□ -0.76
SSB-206ENST00000461708 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
SSB-206ENST00000461708 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
SSB-206ENST00000461708 HIGD2AQ9BW72 106 aa10.28□□□□□ -0.76
SSB-206ENST00000461708 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
SSB-206ENST00000461708 TMEM223A0PJW6 202 aa10.27□□□□□ -0.77
SSB-206ENST00000461708 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
SSB-206ENST00000461708 C3orf22Q8N5N4 141 aa10.26□□□□□ -0.77
SSB-206ENST00000461708 SPRR4Q96PI1 79 aa10.26□□□□□ -0.77
SSB-206ENST00000461708 ZNF706Q9Y5V0 76 aaPredicted RBP10.26□□□□□ -0.77
SSB-206ENST00000461708 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
SSB-206ENST00000461708 PRYO14603 147 aa10.24□□□□□ -0.77
SSB-206ENST00000461708 LINC00337Q8N6G1 96 aa10.24□□□□□ -0.77
SSB-206ENST00000461708 SPRR1AP35321 89 aa10.23□□□□□ -0.77
SSB-206ENST00000461708 HERV-K104P63124 156 aa10.23□□□□□ -0.77
SSB-206ENST00000461708 IFI27L1Q96BM0 104 aa10.23□□□□□ -0.77
SSB-206ENST00000461708 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
SSB-206ENST00000461708 LINC00587B1AMM8 73 aa10.22□□□□□ -0.77
SSB-206ENST00000461708 ATP6V1G1O75348 118 aa10.22□□□□□ -0.77
SSB-206ENST00000461708 SNAPINO95295 136 aa10.22□□□□□ -0.77
SSB-206ENST00000461708 FP248Q71RG6 208 aaPredicted RBP10.22□□□□□ -0.77
SSB-206ENST00000461708 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
SSB-206ENST00000461708 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 APOC3P02656 99 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 SMIM13P0DJ93 91 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 BOD1L2Q8IYS8 172 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 SVBPQ8N300 66 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
SSB-206ENST00000461708 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
SSB-206ENST00000461708 NDUFA5Q16718 116 aa10.19□□□□□ -0.78
SSB-206ENST00000461708 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
SSB-206ENST00000461708 MIR7-3HGQ8N6C7 128 aa10.19□□□□□ -0.78
SSB-206ENST00000461708 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
SSB-206ENST00000461708 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
SSB-206ENST00000461708 NDUFA12Q9UI09 145 aa10.17□□□□□ -0.78
SSB-206ENST00000461708 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
SSB-206ENST00000461708 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
SSB-206ENST00000461708 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
SSB-206ENST00000461708 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
SSB-206ENST00000461708 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 NCR3O14931 201 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 SPINK1P00995 79 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 S100A12P80511 92 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 Q8NBF4 154 aa10.15□□□□□ -0.78
SSB-206ENST00000461708 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
SSB-206ENST00000461708 HSBP1O75506 76 aa10.13□□□□□ -0.79
SSB-206ENST00000461708 TRBV10-2A0A0K0K1G8 114 aa10.12□□□□□ -0.79
SSB-206ENST00000461708 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
SSB-206ENST00000461708 DAND5Q8N907 189 aa10.11□□□□□ -0.79
SSB-206ENST00000461708 B5MCH6 92 aa10.1□□□□□ -0.79
SSB-206ENST00000461708 RPS29P62273 56 aaKnown RBP10.1□□□□□ -0.79
SSB-206ENST00000461708 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
SSB-206ENST00000461708 LEPROTO15243 131 aa10.09□□□□□ -0.79
SSB-206ENST00000461708 PLNP26678 52 aa10.08□□□□□ -0.8
SSB-206ENST00000461708 SSBP3-AS1Q7Z2R9 100 aa10.08□□□□□ -0.8
SSB-206ENST00000461708 DDTP30046 118 aa10.07□□□□□ -0.8
SSB-206ENST00000461708 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
SSB-206ENST00000461708 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
SSB-206ENST00000461708 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
SSB-206ENST00000461708 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
SSB-206ENST00000461708 NMUP48645 174 aa10.06□□□□□ -0.8
SSB-206ENST00000461708 Q6ZRX8 168 aa10.06□□□□□ -0.8
SSB-206ENST00000461708 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
SSB-206ENST00000461708 J3QQQ9 107 aa10.05□□□□□ -0.8
SSB-206ENST00000461708 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
SSB-206ENST00000461708 NDUFC2O95298 119 aa10.05□□□□□ -0.8
SSB-206ENST00000461708 IGLV6-57P01721 117 aa10.04□□□□□ -0.8
SSB-206ENST00000461708 Q9BRP9 147 aa10.04□□□□□ -0.8
SSB-206ENST00000461708 H0Y8G0 127 aa10.03□□□□□ -0.8
SSB-206ENST00000461708 HERVK_113P61574 105 aa10.03□□□□□ -0.8
SSB-206ENST00000461708 MOBPQ13875 183 aa10.03□□□□□ -0.8
SSB-206ENST00000461708 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
SSB-206ENST00000461708 DPM2O94777 84 aa10.02□□□□□ -0.81
SSB-206ENST00000461708 LINC00310P59036 64 aa10.02□□□□□ -0.81
SSB-206ENST00000461708 Q8N377 158 aa10.02□□□□□ -0.81
SSB-206ENST00000461708 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
SSB-206ENST00000461708 IGLV9-49A0A0B4J1Y8 123 aa10.01□□□□□ -0.81
SSB-206ENST00000461708 SLC25A20O43772 301 aa10.01□□□□□ -0.81
SSB-206ENST00000461708 SERF1AO75920 110 aa10.01□□□□□ -0.81
SSB-206ENST00000461708 TRGC2P03986 189 aa10.01□□□□□ -0.81
SSB-206ENST00000461708 SEC61BP60468 96 aaKnown RBP10.01□□□□□ -0.81
SSB-206ENST00000461708 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
SSB-206ENST00000461708 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
SSB-206ENST00000461708 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms