RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 LINC00167Q96N53 147 aa8.43□□□□□ -1.06
DNMT3A-207ENST00000461228 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
DNMT3A-207ENST00000461228 FP248Q71RG6 208 aaPredicted RBP8.41□□□□□ -1.06
DNMT3A-207ENST00000461228 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
DNMT3A-207ENST00000461228 UBE2AP49459 152 aa8.4□□□□□ -1.06
DNMT3A-207ENST00000461228 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.06
DNMT3A-207ENST00000461228 TOMM6Q96B49 74 aa8.4□□□□□ -1.06
DNMT3A-207ENST00000461228 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
DNMT3A-207ENST00000461228 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
DNMT3A-207ENST00000461228 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
DNMT3A-207ENST00000461228 ZC2HC1BQ5TFG8 222 aa8.38□□□□□ -1.07
DNMT3A-207ENST00000461228 ERASQ7Z444 233 aa8.38□□□□□ -1.07
DNMT3A-207ENST00000461228 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
DNMT3A-207ENST00000461228 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
DNMT3A-207ENST00000461228 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
DNMT3A-207ENST00000461228 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
DNMT3A-207ENST00000461228 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
DNMT3A-207ENST00000461228 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
DNMT3A-207ENST00000461228 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
DNMT3A-207ENST00000461228 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
DNMT3A-207ENST00000461228 BAGE3Q86Y29 109 aa8.35□□□□□ -1.07
DNMT3A-207ENST00000461228 PRO1933Q9H354 126 aa8.35□□□□□ -1.07
DNMT3A-207ENST00000461228 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
DNMT3A-207ENST00000461228 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
DNMT3A-207ENST00000461228 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
DNMT3A-207ENST00000461228 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
DNMT3A-207ENST00000461228 ATP5LO75964 103 aa8.33□□□□□ -1.08
DNMT3A-207ENST00000461228 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
DNMT3A-207ENST00000461228 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
DNMT3A-207ENST00000461228 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 VPREB1P12018 145 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 PRLHP81277 87 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 COX17Q14061 63 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
DNMT3A-207ENST00000461228 IGLV5-39A0A0G2JS06 123 aa8.31□□□□□ -1.08
DNMT3A-207ENST00000461228 H3BRM9 83 aa8.31□□□□□ -1.08
DNMT3A-207ENST00000461228 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
DNMT3A-207ENST00000461228 M0R143 59 aa8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 M0R378 163 aa8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 RPL24P83731 157 aaKnown RBP8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 FSIP2Q5CZC0 6907 aa8.3□□□□□ -1.08
DNMT3A-207ENST00000461228 SERF1AO75920 110 aa8.29□□□□□ -1.08
DNMT3A-207ENST00000461228 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
DNMT3A-207ENST00000461228 SCGB3A1Q96QR1 104 aa8.29□□□□□ -1.08
DNMT3A-207ENST00000461228 CST9LQ9H4G1 147 aa8.29□□□□□ -1.08
DNMT3A-207ENST00000461228 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
DNMT3A-207ENST00000461228 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.09
DNMT3A-207ENST00000461228 PMVKQ15126 192 aa8.27□□□□□ -1.09
DNMT3A-207ENST00000461228 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
DNMT3A-207ENST00000461228 A0A1B0GV90 55 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 IGLC3P0DOY3 106 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
DNMT3A-207ENST00000461228 TMEM238C9JI98 176 aa8.25□□□□□ -1.09
DNMT3A-207ENST00000461228 LINC01547P58512 204 aaPredicted RBP8.25□□□□□ -1.09
DNMT3A-207ENST00000461228 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
DNMT3A-207ENST00000461228 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
DNMT3A-207ENST00000461228 C20orf202A1L168 122 aa8.24□□□□□ -1.09
DNMT3A-207ENST00000461228 SPINK1P00995 79 aa8.24□□□□□ -1.09
DNMT3A-207ENST00000461228 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
DNMT3A-207ENST00000461228 KRTDAPP60985 99 aa8.24□□□□□ -1.09
DNMT3A-207ENST00000461228 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
DNMT3A-207ENST00000461228 HSBP1O75506 76 aa8.23□□□□□ -1.09
DNMT3A-207ENST00000461228 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
DNMT3A-207ENST00000461228 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
DNMT3A-207ENST00000461228 PFN2P35080 140 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 LINC00310P59036 64 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.1
DNMT3A-207ENST00000461228 PRYO14603 147 aa8.2□□□□□ -1.1
DNMT3A-207ENST00000461228 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
DNMT3A-207ENST00000461228 SPRR1AP35321 89 aa8.2□□□□□ -1.1
DNMT3A-207ENST00000461228 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
DNMT3A-207ENST00000461228 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
DNMT3A-207ENST00000461228 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 COL5A1-AS1Q5SY13 56 aa8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 Q8NDZ9 215 aa8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 C18orf32Q8TCD1 76 aa8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
DNMT3A-207ENST00000461228 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
DNMT3A-207ENST00000461228 Q8NBF4 154 aa8.18□□□□□ -1.1
DNMT3A-207ENST00000461228 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
DNMT3A-207ENST00000461228 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
DNMT3A-207ENST00000461228 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
DNMT3A-207ENST00000461228 XP32Q5T750 250 aa8.16□□□□□ -1.1
DNMT3A-207ENST00000461228 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
DNMT3A-207ENST00000461228 A0A096LNJ9 63 aa8.15□□□□□ -1.1
DNMT3A-207ENST00000461228 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
DNMT3A-207ENST00000461228 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
DNMT3A-207ENST00000461228 DAND5Q8N907 189 aa8.15□□□□□ -1.1
DNMT3A-207ENST00000461228 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms