RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SYCP2Q9BX26 1530 aa1.72□□□□□ -2.13
CCDC50-203ENST00000460064 PCNTO95613 3336 aa1.72□□□□□ -2.13
CCDC50-203ENST00000460064 CROCC2H7BZ55 1655 aa1.72□□□□□ -2.13
CCDC50-203ENST00000460064 TRAV21A0A0B4J279 112 aa1.72□□□□□ -2.13
CCDC50-203ENST00000460064 LAMC1P11047 1609 aa1.72□□□□□ -2.13
CCDC50-203ENST00000460064 CICQ96RK0 1608 aaPredicted RBP1.72□□□□□ -2.13
CCDC50-203ENST00000460064 PKD1L3Q7Z443 1732 aa1.71□□□□□ -2.13
CCDC50-203ENST00000460064 PARP4Q9UKK3 1724 aaKnown RBP1.71□□□□□ -2.13
CCDC50-203ENST00000460064 TNRC18O15417 2968 aaPredicted RBP1.71□□□□□ -2.14
CCDC50-203ENST00000460064 FXYD6Q9H0Q3 95 aa1.71□□□□□ -2.14
CCDC50-203ENST00000460064 TIAM2Q8IVF5 1701 aa1.71□□□□□ -2.14
CCDC50-203ENST00000460064 C5P01031 1676 aa1.71□□□□□ -2.14
CCDC50-203ENST00000460064 NHSQ6T4R5 1651 aa1.71□□□□□ -2.14
CCDC50-203ENST00000460064 CACNA1AO00555 2505 aa1.7□□□□□ -2.14
CCDC50-203ENST00000460064 LINC01549A6NIU2 74 aa1.7□□□□□ -2.14
CCDC50-203ENST00000460064 DEFB123Q8N688 67 aa1.7□□□□□ -2.14
CCDC50-203ENST00000460064 ANKRD50Q9ULJ7 1429 aa1.7□□□□□ -2.14
CCDC50-203ENST00000460064 NCOA6Q14686 2063 aaPredicted RBP1.7□□□□□ -2.14
CCDC50-203ENST00000460064 PDE4DIPQ5VU43 2346 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 TSC2P49815 1807 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 A0A0D9SFI3 127 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 SNRPGP15A8MWD9 76 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 G3V318 75 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 NREPQ16612 68 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 TRPM2O94759 1503 aa1.69□□□□□ -2.14
CCDC50-203ENST00000460064 MED13LQ71F56 2210 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 A0A096LNT2 108 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 LCE6AA0A183 80 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 C10orf99Q6UWK7 81 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 MYO7AQ13402 2215 aa1.68□□□□□ -2.14
CCDC50-203ENST00000460064 GOLGB1Q14789 3259 aaKnown RBP1.67□□□□□ -2.14
CCDC50-203ENST00000460064 COL14A1Q05707 1796 aaKnown RBP1.67□□□□□ -2.14
CCDC50-203ENST00000460064 PAPPA2Q9BXP8 1791 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
CCDC50-203ENST00000460064 TRBV6-1A0A0K0K1D8 114 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 NDUFB1O75438 58 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 Q6ZRX8 168 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 PLAC4Q8WY50 150 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 BCORQ6W2J9 1755 aa1.67□□□□□ -2.14
CCDC50-203ENST00000460064 FMN2Q9NZ56 1722 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 ZFHX3Q15911 3703 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 DEFB112Q30KQ8 113 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 SSC5DA1L4H1 1573 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 E9PCH4 1651 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 TNRC6CQ9HCJ0 1690 aaKnown RBP1.66□□□□□ -2.14
CCDC50-203ENST00000460064 HELZ2Q9BYK8 2649 aaKnown RBP1.66□□□□□ -2.14
CCDC50-203ENST00000460064 EIF2AK4Q9P2K8 1649 aaKnown RBP1.66□□□□□ -2.14
CCDC50-203ENST00000460064 ABCC6O95255 1503 aa1.66□□□□□ -2.14
CCDC50-203ENST00000460064 TRBV30A0A0K0K1B3 111 aa1.65□□□□□ -2.15
CCDC50-203ENST00000460064 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
CCDC50-203ENST00000460064 GAFA1Q96PS6 74 aa1.65□□□□□ -2.15
CCDC50-203ENST00000460064 NRAPQ86VF7 1730 aa1.65□□□□□ -2.15
CCDC50-203ENST00000460064 A0A0C4DFX4 3053 aa1.65□□□□□ -2.15
CCDC50-203ENST00000460064 A0A1B0GU69 56 aa1.64□□□□□ -2.15
CCDC50-203ENST00000460064 LY6G6CO95867 125 aa1.64□□□□□ -2.15
CCDC50-203ENST00000460064 ENHOQ6UWT2 76 aa1.64□□□□□ -2.15
CCDC50-203ENST00000460064 PRO3102Q9H379 93 aa1.64□□□□□ -2.15
CCDC50-203ENST00000460064 LRRC37A2A6NM11 1700 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 PKD1L2Q7Z442 2459 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 SZT2Q5T011 3432 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 HAMPP81172 84 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 NCBP2-AS2Q69YL0 99 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 ABCA1O95477 2261 aa1.63□□□□□ -2.15
CCDC50-203ENST00000460064 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
CCDC50-203ENST00000460064 COL6A3P12111 3177 aa1.62□□□□□ -2.15
CCDC50-203ENST00000460064 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
CCDC50-203ENST00000460064 K7EMI3 77 aa1.61□□□□□ -2.15
CCDC50-203ENST00000460064 NCR3O14931 201 aa1.61□□□□□ -2.15
CCDC50-203ENST00000460064 NRXN3Q9Y4C0 1643 aa1.61□□□□□ -2.15
CCDC50-203ENST00000460064 DOT1LQ8TEK3 1739 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 COX7BP24311 80 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 SSBP3-AS1Q7Z2R9 100 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 SPTBN5Q9NRC6 3674 aaKnown RBP1.6□□□□□ -2.15
CCDC50-203ENST00000460064 F5P12259 2224 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 QSER1Q2KHR3 1735 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 UNC80Q8N2C7 3258 aa1.6□□□□□ -2.15
CCDC50-203ENST00000460064 FCER1GP30273 86 aa1.59□□□□□ -2.15
CCDC50-203ENST00000460064 RPL37P61927 97 aaKnown RBP1.59□□□□□ -2.15
CCDC50-203ENST00000460064 SPINK13Q1W4C9 94 aa1.59□□□□□ -2.15
CCDC50-203ENST00000460064 LINC00575Q6W349 94 aa1.59□□□□□ -2.15
CCDC50-203ENST00000460064 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
CCDC50-203ENST00000460064 CDC42BPAQ5VT25 1732 aa1.59□□□□□ -2.16
CCDC50-203ENST00000460064 ZFHX4Q86UP3 3567 aa1.58□□□□□ -2.16
CCDC50-203ENST00000460064 CACNA1CQ13936 2221 aa1.58□□□□□ -2.16
CCDC50-203ENST00000460064 PIN1P1O15428 100 aa1.58□□□□□ -2.16
CCDC50-203ENST00000460064 VCANP13611 3396 aa1.58□□□□□ -2.16
CCDC50-203ENST00000460064 KMT2BQ9UMN6 2715 aaPredicted RBP1.58□□□□□ -2.16
CCDC50-203ENST00000460064 CACNA1BQ00975 2339 aa1.57□□□□□ -2.16
CCDC50-203ENST00000460064 UNC79Q9P2D8 2635 aa1.57□□□□□ -2.16
CCDC50-203ENST00000460064 NDUFA4O00483 81 aa1.57□□□□□ -2.16
CCDC50-203ENST00000460064 UBL5Q9BZL1 73 aa1.57□□□□□ -2.16
CCDC50-203ENST00000460064 CLTCL1P53675 1640 aa1.57□□□□□ -2.16
CCDC50-203ENST00000460064 GCC2Q8IWJ2 1684 aa1.56□□□□□ -2.16
CCDC50-203ENST00000460064 LY75O60449 1722 aa1.56□□□□□ -2.16
CCDC50-203ENST00000460064 CADP27708 2225 aa1.56□□□□□ -2.16
CCDC50-203ENST00000460064 FLG2Q5D862 2391 aaPredicted RBP1.56□□□□□ -2.16
CCDC50-203ENST00000460064 TJP1Q07157 1748 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms