RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
VPS50-207ENST00000458530 A4D1N5 150 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 TAX1BP3O14907 124 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 ADAMTSL4-AS1Q5T5F5 129 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 NTN5Q8WTR8 489 aaPredicted RBP5.95□□□□□ -1.46
VPS50-207ENST00000458530 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 DNAH2Q9P225 4427 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
VPS50-207ENST00000458530 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 PSCAO43653 123 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 PFN2P35080 140 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 C14orf177Q52M58 125 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 C2orf82Q6UX34 121 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
VPS50-207ENST00000458530 NBDYA0A0U1RRE5 68 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 A0A1B0GV90 55 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 NPC2P61916 151 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 DAND5Q8N907 189 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
VPS50-207ENST00000458530 K7ERJ3 54 aa5.92□□□□□ -1.46
VPS50-207ENST00000458530 CFC1BP0CG36 223 aa5.92□□□□□ -1.46
VPS50-207ENST00000458530 CFC1P0CG37 223 aa5.92□□□□□ -1.46
VPS50-207ENST00000458530 FABP2P12104 132 aa5.92□□□□□ -1.46
VPS50-207ENST00000458530 HIGD2BQ4VC39 106 aa5.92□□□□□ -1.46
VPS50-207ENST00000458530 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
VPS50-207ENST00000458530 TRAV13-2A0A0B4J235 113 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 LOC107984156A0A0G2JMH3 177 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 H3BUT2 72 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 SYCNQ0VAF6 134 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 VAMP3Q15836 100 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 Q1RN00 199 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 UNQ6190/PRO20217Q6UXQ8 127 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 ARL17AQ8IVW1 177 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 CARD19Q96LW7 228 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 SND1-IT1Q9HBX3 110 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
VPS50-207ENST00000458530 A0A1W2PPM0 123 aa5.9□□□□□ -1.46
VPS50-207ENST00000458530 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
VPS50-207ENST00000458530 C6orf223Q8N319 242 aa5.9□□□□□ -1.46
VPS50-207ENST00000458530 PKD1P98161 4303 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 NDUFC2O95298 119 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 TSPAN13O95857 204 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 COX6CP09669 75 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 RPL13AP40429 203 aaKnown RBP5.89□□□□□ -1.47
VPS50-207ENST00000458530 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 LINC00336Q6ZUF6 198 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 LINC00526Q96FQ7 95 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 C6orf48Q9UBA6 75 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 HSPG2P98160 4391 aa5.89□□□□□ -1.47
VPS50-207ENST00000458530 NDUFC2-KCTD14E9PQ53 114 aa5.88□□□□□ -1.47
VPS50-207ENST00000458530 PSMB2P49721 201 aa5.88□□□□□ -1.47
VPS50-207ENST00000458530 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
VPS50-207ENST00000458530 Q6ZRU5 148 aa5.88□□□□□ -1.47
VPS50-207ENST00000458530 C9orf116Q5BN46 136 aaPredicted RBP5.87□□□□□ -1.47
VPS50-207ENST00000458530 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
VPS50-207ENST00000458530 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
VPS50-207ENST00000458530 HERC1Q15751 4861 aa5.87□□□□□ -1.47
VPS50-207ENST00000458530 TRBV20-1A0A075B6N2 111 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 GAGE10A6NGK3 116 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 H7C2G1 150 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 SCGB1C2P0DMR2 95 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
VPS50-207ENST00000458530 LOC107984640A0A0U1RRK4 108 aa5.85□□□□□ -1.47
VPS50-207ENST00000458530 K7EP34 96 aa5.85□□□□□ -1.47
VPS50-207ENST00000458530 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
VPS50-207ENST00000458530 NAA38Q9BRA0 125 aaKnown RBP5.85□□□□□ -1.47
VPS50-207ENST00000458530 TRBV10-2A0A0K0K1G8 114 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 LECT2O14960 151 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
VPS50-207ENST00000458530 UBE2V1Q13404 147 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 OR13C6PQ8NH95 151 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
VPS50-207ENST00000458530 DMBT1Q9UGM3 2413 aaPredicted RBP5.83□□□□□ -1.48
VPS50-207ENST00000458530 RTL8CO15255 209 aa5.83□□□□□ -1.48
VPS50-207ENST00000458530 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
VPS50-207ENST00000458530 Q6ZR54 194 aa5.83□□□□□ -1.48
VPS50-207ENST00000458530 IGKV2-28A0A075B6P5 120 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 M0R2N4 97 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 TRIAP1O43715 76 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 IGKV2D-28P01615 120 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 ATXN8Q156A1 80 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 GAGE2EQ4V326 116 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 C1orf134Q5TEV5 83 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
VPS50-207ENST00000458530 LINC00337Q8N6G1 96 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 GAGE2DQ9UEU5 116 aa5.82□□□□□ -1.48
VPS50-207ENST00000458530 RPL28P46779 137 aaKnown RBP5.81□□□□□ -1.48
VPS50-207ENST00000458530 Q6ZRP5 223 aa5.81□□□□□ -1.48
VPS50-207ENST00000458530 NKAPP1Q8N9T2 125 aa5.81□□□□□ -1.48
VPS50-207ENST00000458530 XAGE1AQ9HD64 81 aa5.81□□□□□ -1.48
VPS50-207ENST00000458530 LRCOL1A6NCL2 159 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms