RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 F8P00451 2351 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 BAHCC1Q9P281 2608 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 CYSRT1A8MQ03 144 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 F8VRH5 84 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 K7ERJ3 54 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 M0QY20 66 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 UQCRQO14949 82 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 DEFB121Q5J5C9 76 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 PYY3Q5JQD4 70 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 COL5A1-AS1Q5SY13 56 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 HHLA3Q9XRX5 114 aa3.16□□□□□ -1.9
SPARCL1-204ENST00000458304 ZNF469Q96JG9 3925 aaPredicted RBP3.15□□□□□ -1.9
SPARCL1-204ENST00000458304 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.9
SPARCL1-204ENST00000458304 POLR2KP53803 58 aaKnown RBP3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 HSD52Q0P140 79 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 MIAQ16674 131 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 LINC01545Q5VT33 79 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 SFTA2Q6UW10 78 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 Q6ZTI0 123 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 SMCR5Q8TEV8 140 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 MIEN1Q9BRT3 115 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 SNHG12Q9BXW3 62 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 WFDC10AQ9H1F0 79 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 ICOSQ9Y6W8 199 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 C2CD3Q4AC94 2353 aa3.15□□□□□ -1.91
SPARCL1-204ENST00000458304 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 C3orf84H3BNL1 204 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 CIRBPQ14011 172 aaKnown RBP3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 TMEM170BQ5T4T1 132 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 Q6ZQT7 251 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 C7orf65Q6ZTY9 151 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 DPH3Q96FX2 82 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 TIMM21Q9BVV7 248 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 HIVEP1P15822 2718 aa3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 FLNBO75369 2602 aaKnown RBP3.14□□□□□ -1.91
SPARCL1-204ENST00000458304 SETXQ7Z333 2677 aaKnown RBP3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 MUC4Q99102 2169 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 IGLV2-18A0A075B6J9 118 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 TMEM262E9PQX1 116 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 H3BNG1 76 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 NUPR1O60356 82 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 TCL1BO95988 128 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 HTN3P15516 51 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 TMEM258P61165 79 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 MRPS36P82909 103 aaKnown RBP3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 SS18Q15532 418 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 SDIM1Q6ZPB5 146 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 ATOH7Q8N100 152 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 SPANXA2-OT1Q8N9U9 137 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 C15orf53Q8NAA6 179 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 DIRC1Q969H9 104 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 FN1P02751 2386 aaKnown RBP3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 NF1P21359 2839 aa3.13□□□□□ -1.91
SPARCL1-204ENST00000458304 TEP1Q99973 2627 aaKnown RBP3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 TRAV10A0A0B4J240 114 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 A0A0B4J2C4 111 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 A8MUU9 505 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 CRPP02741 224 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 LINC00315P59091 139 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 UBE2D3P61077 147 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 UBE2D2P62837 147 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 SOSTDC1Q6X4U4 206 aa3.12□□□□□ -1.91
SPARCL1-204ENST00000458304 SETD2Q9BYW2 2564 aaPredicted RBP3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 A0A096LNJ9 63 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 COX8AP10176 69 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 DEFB116Q30KQ4 102 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 Q8NAQ8 132 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 PRO1933Q9H354 126 aa3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 MRPL35Q9NZE8 188 aaKnown RBP3.11□□□□□ -1.91
SPARCL1-204ENST00000458304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 DEFB131BA0A096LNP1 70 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 MYMXA0A1B0GTQ4 84 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 IGIPA6NJ69 53 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 IGLC3P0DOY3 106 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 XCL1P47992 114 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 CCL18P55774 89 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 RPL39P62891 51 aaKnown RBP3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 LELP1Q5T871 98 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 MUC7Q8TAX7 377 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 UBE2D4Q9Y2X8 147 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 JMJD1CQ15652 2540 aa3.1□□□□□ -1.91
SPARCL1-204ENST00000458304 TRBV20-1A0A075B6N2 111 aa3.09□□□□□ -1.91
SPARCL1-204ENST00000458304 ZNF815PA8K554 130 aa3.09□□□□□ -1.91
SPARCL1-204ENST00000458304 H3BT86 120 aa3.09□□□□□ -1.91
SPARCL1-204ENST00000458304 GAS8-AS1O95177 125 aa3.09□□□□□ -1.91
SPARCL1-204ENST00000458304 ANGP03950 147 aaKnown RBP3.09□□□□□ -1.91
SPARCL1-204ENST00000458304 RPL28P46779 137 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms