RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 AHCTF1Q8WYP5 2266 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 MED13LQ71F56 2210 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGLV4-60A0A075B6I1 120 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2-28A0A075B6P5 120 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-21A0A0B4J1V1 117 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 A8MWP4 228 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 DEFB108AA8MXU0 73 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 H3BQ85 93 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2D-28P01615 120 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-53P01767 116 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 IGLV7-43P04211 117 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 SPINK7P58062 85 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 WT1-ASQ06250 92 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 DEFB114Q30KQ6 69 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 CSAG1Q6PB30 78 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 ZFAND2AQ8N6M9 145 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 CNEP1R1Q8N9A8 125 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 ST20-AS1Q8NBB2 130 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 Q8NDZ9 215 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 LEAP2Q969E1 77 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 DOPEY2Q9Y3R5 2298 aa1.18□□□□□ -2.22
LINC02540-201ENST00000455554 NAV3Q8IVL0 2385 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 A8MUU9 505 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 M0R2N4 97 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 NDUFA4O00483 81 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV1-17P01599 117 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 PRB1P04280 392 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 MGPP08493 103 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 P0C880 135 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 SPAG11BQ08648 103 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 MIR22HGQ0VDD5 57 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 KPRPQ5T749 579 aaPredicted RBP1.17□□□□□ -2.22
LINC02540-201ENST00000455554 SPAG11AQ6PDA7 123 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 Q8TAT8 98 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 TMEM167AQ8TBQ9 72 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 COX7B2Q8TF08 81 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 LINC00467Q9BRT7 94 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 TTTY12Q9BZ98 90 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 WFDC10AQ9H1F0 79 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 LENEPQ9Y5L5 61 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
LINC02540-201ENST00000455554 BRWD1Q9NSI6 2320 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 CUL9Q8IWT3 2517 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 ANKRD17O75179 2603 aaKnown RBP1.16□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-15A0A0B4J1V0 119 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 LINC00959A0A1B0GUT2 108 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 H3BPC8 53 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 I3L2K1 104 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 COA5Q86WW8 74 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 MUC7Q8TAX7 377 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 GAFA1Q96PS6 74 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
LINC02540-201ENST00000455554 ICE1Q9Y2F5 2266 aa1.15□□□□□ -2.22
LINC02540-201ENST00000455554 A0A096LNT2 108 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 IGKV3D-11A0A0A0MRZ8 115 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 H0Y9P7 68 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 M0QY20 66 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 MSMBP08118 114 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 CCL18P55774 89 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
LINC02540-201ENST00000455554 KRTAP25-1Q3LHN0 102 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 C10orf55Q5SWW7 151 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 SPATA8Q6RVD6 105 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 LINC00575Q6W349 94 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 CDKN2A-AS1Q9UH64 79 aa1.15□□□□□ -2.23
LINC02540-201ENST00000455554 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
LINC02540-201ENST00000455554 A0A087WSZ3 146 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 K7EIM0 57 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 RNASE3P12724 160 aaKnown RBP1.14□□□□□ -2.23
LINC02540-201ENST00000455554 COX7BP24311 80 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 LINC00158P58513 81 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 COX6A2Q02221 97 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 DEFB113Q30KQ7 82 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 PRR9Q5T870 116 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 SPINT4Q6UDR6 99 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.14□□□□□ -2.23
LINC02540-201ENST00000455554 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 DEFB104AQ8WTQ1 72 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 C20orf166-AS1Q96NR2 134 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 FAM215AQ9Y5M1 114 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 GPR179Q6PRD1 2367 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
LINC02540-201ENST00000455554 ASXL3Q9C0F0 2248 aa1.13□□□□□ -2.23
LINC02540-201ENST00000455554 TECTAO75443 2155 aa1.13□□□□□ -2.23
LINC02540-201ENST00000455554 IGLV10-54A0A075B6I4 117 aa1.13□□□□□ -2.23
LINC02540-201ENST00000455554 C1orf137Q5JT78 98 aa1.13□□□□□ -2.23
LINC02540-201ENST00000455554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.13□□□□□ -2.23
LINC02540-201ENST00000455554 DEFB110Q30KQ9 67 aa1.12□□□□□ -2.23
LINC02540-201ENST00000455554 KRTAP26-1Q6PEX3 210 aa1.12□□□□□ -2.23
LINC02540-201ENST00000455554 KRTAP13-1Q8IUC0 172 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms