RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C20orf78Q9BR46 151 aa3.49□□□□□ -1.85
HLA-DPA3-207ENST00000454398 A0A1B0GXF2 115 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 HSBP1L1C9JCN9 74 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 H0Y8G0 127 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 BCE1O60756 84 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PPP1R17O96001 155 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PPBPP02775 128 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CKS1BP61024 79 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PRLHP81277 87 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 C18orf32Q8TCD1 76 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CDIP1Q9H305 208 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TP73-AS1Q9UF72 201 aa3.48□□□□□ -1.85
HLA-DPA3-207ENST00000454398 IGKV2-28A0A075B6P5 120 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 F8WDY8 70 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 TAX1BP3O14907 124 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 IGKV2D-28P01615 120 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PRSS2P07478 247 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CRYGAP11844 174 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 OCIAD2Q56VL3 154 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 LINC00304Q8N9R0 145 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 PRELID3AQ96N28 172 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CST9LQ9H4G1 147 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
HLA-DPA3-207ENST00000454398 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 K7ERU9 68 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 UBE2AP49459 152 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 BVES-AS1Q5T3Y7 98 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 SLC25A34Q6PIV7 304 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 C2orf66Q6UXQ4 117 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 C3orf22Q8N5N4 141 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 LINC00167Q96N53 147 aa3.46□□□□□ -1.86
HLA-DPA3-207ENST00000454398 TMEM238C9JI98 176 aa3.45□□□□□ -1.86
HLA-DPA3-207ENST00000454398 C6orf226Q5I0X4 101 aa3.45□□□□□ -1.86
HLA-DPA3-207ENST00000454398 Q8IZM0 81 aa3.45□□□□□ -1.86
HLA-DPA3-207ENST00000454398 CYSLTR1Q9Y271 337 aa3.45□□□□□ -1.86
HLA-DPA3-207ENST00000454398 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 F8VRH5 84 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 SYS1-DBNDD2H3BUS1 97 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 SPINK8P0C7L1 97 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 GTF2H5Q6ZYL4 71 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 Q8NDZ9 215 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 AMELXQ99217 191 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 PMCHL2Q9BQD1 86 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 NAA38Q9BRA0 125 aaKnown RBP3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 MAP1LC3CQ9BXW4 147 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 MAP1LC3AQ9H492 121 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 PYGO1Q9Y3Y4 419 aa3.44□□□□□ -1.86
HLA-DPA3-207ENST00000454398 A0A1B0GW15 77 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 A6NDN8 102 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 IGIPA6NJ69 53 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 PET117Q6UWS5 81 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 FA2HQ7L5A8 372 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 CHCHD1Q96BP2 118 aaKnown RBP3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 VCX2Q9H322 139 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 PPDPFQ9H3Y8 114 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 GEMIN7Q9H840 131 aaKnown RBP3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 HSPB8Q9UJY1 196 aa3.43□□□□□ -1.86
HLA-DPA3-207ENST00000454398 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 H3BUT2 72 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 K7EP34 96 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 FAM19A1Q7Z5A9 133 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 Q8N8P6 123 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 COX7B2Q8TF08 81 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 RAB37Q96AX2 223 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 URB1-AS1Q96HZ7 61 aa3.42□□□□□ -1.86
HLA-DPA3-207ENST00000454398 H3BRM9 83 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 COX8AP10176 69 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 PFN2P35080 140 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 HERVK_113P63121 156 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 SEC11AP67812 179 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 HSD52Q0P140 79 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 LINC01561Q8N1V8 128 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 DAND5Q8N907 189 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
HLA-DPA3-207ENST00000454398 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 C9orf118A6NHY6 69 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 M0R378 163 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 CXCL5P42830 114 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FAM229BQ4G0N7 80 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 TMEM126AQ9H061 195 aa3.4□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms