RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
HMGB1P26-201ENST00000452520 ITPR3Q14573 2671 aa1.44□□□□□ -2.18
HMGB1P26-201ENST00000452520 TENM4Q6N022 2769 aa1.44□□□□□ -2.18
HMGB1P26-201ENST00000452520 IGF2RP11717 2491 aa1.44□□□□□ -2.18
HMGB1P26-201ENST00000452520 F5P12259 2224 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 WDFY3Q8IZQ1 3526 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 TRAV1-2A0A0B4J238 106 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 NAP1L6A6NFF2 107 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 M0R135 149 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 GNGT2O14610 69 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 COL5A1-AS1Q5SY13 56 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 C6orf52Q5T4I8 152 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 SNHG12Q9BXW3 62 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 V9GYH0 126 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 TEX15Q9BXT5 2789 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 C2CD3Q4AC94 2353 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 CACNA1EQ15878 2313 aa1.43□□□□□ -2.18
HMGB1P26-201ENST00000452520 MGAQ8IWI9 3026 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 UBR5O95071 2799 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 NAV3Q8IVL0 2385 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 FBN2P35556 2912 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 ACACAQ13085 2346 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 Q5VV11 94 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 SMIM11BQ8TCY0 68 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 BPESC1Q9GZL8 116 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 MANBALQ9NQG1 85 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 SPTA1P02549 2419 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 SMG1Q96Q15 3661 aaKnown RBP1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 DOCK2Q92608 1830 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 AHCTF1Q8WYP5 2266 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 SPTAN1Q13813 2472 aaKnown RBP1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 POLQO75417 2590 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 LAMA5O15230 3695 aa1.42□□□□□ -2.18
HMGB1P26-201ENST00000452520 ATMQ13315 3056 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 IGSF10Q6WRI0 2623 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 TMEM14DPA8MWL7 114 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 HMGN4O00479 90 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 KRTDAPP60985 99 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 Q0VG73 95 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 Q6ZRX8 168 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 FAM167A-AS1Q96KT0 104 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 DPY30Q9C005 99 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 CRYBG3Q68DQ2 2970 aa1.41□□□□□ -2.18
HMGB1P26-201ENST00000452520 CFAP46Q8IYW2 2715 aa1.4□□□□□ -2.18
HMGB1P26-201ENST00000452520 RELNP78509 3460 aa1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 TRAV22A0A0B4J277 110 aa1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 AP4S1Q9Y587 144 aa1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 ANKRD17O75179 2603 aaKnown RBP1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 MYO9AB2RTY4 2548 aa1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 APC2O95996 2303 aa1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 UTP20O75691 2785 aaKnown RBP1.4□□□□□ -2.19
HMGB1P26-201ENST00000452520 CEP295Q9C0D2 2601 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 TANC1Q9C0D5 1861 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 ITPR1Q14643 2758 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 CELSR1Q9NYQ6 3014 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 CTXND1A0A1B0GTU2 59 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 LINC00032P0C843 101 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 UBA52P62987 128 aaKnown RBP1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 SEC11AP67812 179 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 CDC42SE2Q9NRR3 84 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 UQCR10Q9UDW1 63 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 PCNX1Q96RV3 2341 aa1.39□□□□□ -2.19
HMGB1P26-201ENST00000452520 BOD1L1Q8NFC6 3051 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 ZNF236Q9UL36 1845 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 A0A0D9SG42 100 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 LOC285095A0A1B0GVY8 99 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 CRYM-AS1A6NIL9 109 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 F8VRH5 84 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 SFTA2Q6UW10 78 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 ZFHX3Q15911 3703 aa1.38□□□□□ -2.19
HMGB1P26-201ENST00000452520 CELSR2Q9HCU4 2923 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 ADGRG4Q8IZF6 3080 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 FBN3Q75N90 2809 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 SETD2Q9BYW2 2564 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 UBE2D3P61077 147 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 UBE2D2P62837 147 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 DEFB109BQ30KR1 87 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 AMELXQ99217 191 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 SMR3AQ99954 134 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 NBPF19A0A087WUL8 3843 aa1.37□□□□□ -2.19
HMGB1P26-201ENST00000452520 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 BAGE2Q86Y30 109 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 KNL1Q8NG31 2342 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 PRO1854Q9UHT4 67 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 LINC01558Q9Y6Z2 57 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 LRRK2Q5S007 2527 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 F8P00451 2351 aa1.36□□□□□ -2.19
HMGB1P26-201ENST00000452520 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 COX6B1P14854 86 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 GCHFRP30047 84 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 PMCHL2Q9BQD1 86 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 PDZD2O15018 2839 aa1.35□□□□□ -2.19
HMGB1P26-201ENST00000452520 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 AKAP9Q99996 3911 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 LRBAP50851 2863 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 ITPR2Q14571 2701 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms