RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LINC00959A0A1B0GUT2 108 aa2.09□□□□□ -2.07
HMGB3P21-201ENST00000452483 PIN1P1O15428 100 aa2.09□□□□□ -2.07
HMGB3P21-201ENST00000452483 DEFB103AP81534 67 aa2.09□□□□□ -2.07
HMGB3P21-201ENST00000452483 LINC00575Q6W349 94 aa2.09□□□□□ -2.07
HMGB3P21-201ENST00000452483 EFCAB6Q5THR3 1501 aa2.08□□□□□ -2.08
HMGB3P21-201ENST00000452483 LY6G6CO95867 125 aa2.08□□□□□ -2.08
HMGB3P21-201ENST00000452483 COX7BP24311 80 aa2.08□□□□□ -2.08
HMGB3P21-201ENST00000452483 ABCA5Q8WWZ7 1642 aa2.07□□□□□ -2.08
HMGB3P21-201ENST00000452483 NDUFA4O00483 81 aa2.07□□□□□ -2.08
HMGB3P21-201ENST00000452483 POLR1AO95602 1720 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P21-201ENST00000452483 F5P12259 2224 aa2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 ANKRD36CQ5JPF3 1778 aa2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 RPL38P63173 70 aaKnown RBP2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 SSC5DA1L4H1 1573 aa2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 ADCY10Q96PN6 1610 aa2.06□□□□□ -2.08
HMGB3P21-201ENST00000452483 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
HMGB3P21-201ENST00000452483 A0A0G2JMZ2 1700 aa2.05□□□□□ -2.08
HMGB3P21-201ENST00000452483 DOT1LQ8TEK3 1739 aa2.05□□□□□ -2.08
HMGB3P21-201ENST00000452483 K7EMI3 77 aa2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 LY75O60449 1722 aa2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 C3P01024 1663 aa2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 KRTAP10-1P60331 282 aa2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 RPL37P61927 97 aaKnown RBP2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 NMES1Q9C002 83 aa2.04□□□□□ -2.08
HMGB3P21-201ENST00000452483 COL4A4P53420 1690 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P21-201ENST00000452483 CMC2Q9NRP2 79 aa2.03□□□□□ -2.08
HMGB3P21-201ENST00000452483 ASCC3Q8N3C0 2202 aaKnown RBP2.03□□□□□ -2.08
HMGB3P21-201ENST00000452483 TJP1Q07157 1748 aa2.03□□□□□ -2.09
HMGB3P21-201ENST00000452483 ERCC6L2Q5T890 1561 aa2.02□□□□□ -2.09
HMGB3P21-201ENST00000452483 KIAA0586Q9BVV6 1533 aa2.02□□□□□ -2.09
HMGB3P21-201ENST00000452483 SERF2P84101 59 aa2.02□□□□□ -2.09
HMGB3P21-201ENST00000452483 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
HMGB3P21-201ENST00000452483 IQGAP2Q13576 1575 aa2.02□□□□□ -2.09
HMGB3P21-201ENST00000452483 SLIT1O75093 1534 aa2.01□□□□□ -2.09
HMGB3P21-201ENST00000452483 CACNA1GO43497 2377 aa2.01□□□□□ -2.09
HMGB3P21-201ENST00000452483 SPTY2D1-AS1A0A0U1RR47 76 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 M0R1W7 72 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 PRB2P02812 416 aaPredicted RBP2□□□□□ -2.09
HMGB3P21-201ENST00000452483 PCOTHQ58A44 107 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 CADP27708 2225 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 PLXNB2O15031 1838 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 LRRC37AA6NMS7 1700 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 QSER1Q2KHR3 1735 aa2□□□□□ -2.09
HMGB3P21-201ENST00000452483 RP1L1Q8IWN7 2480 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 CPSF4LA6NMK7 179 aaKnown RBP1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 PRB1P04280 392 aa1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 ARL14EPLP0DKL9 152 aa1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 PLNP26678 52 aa1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 ABRACLQ9P1F3 81 aa1.99□□□□□ -2.09
HMGB3P21-201ENST00000452483 NRXN3Q9Y4C0 1643 aa1.98□□□□□ -2.09
HMGB3P21-201ENST00000452483 ABCC8Q09428 1581 aa1.98□□□□□ -2.09
HMGB3P21-201ENST00000452483 DEFB114Q30KQ6 69 aa1.97□□□□□ -2.09
HMGB3P21-201ENST00000452483 BAHCC1Q9P281 2608 aa1.96□□□□□ -2.1
HMGB3P21-201ENST00000452483 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
HMGB3P21-201ENST00000452483 KCNQ1DNQ9H478 68 aa1.96□□□□□ -2.1
HMGB3P21-201ENST00000452483 AGLP35573 1532 aa1.96□□□□□ -2.1
HMGB3P21-201ENST00000452483 NWD1Q149M9 1564 aa1.95□□□□□ -2.1
HMGB3P21-201ENST00000452483 ANGP03950 147 aaKnown RBP1.95□□□□□ -2.1
HMGB3P21-201ENST00000452483 FXYD6P3P58550 94 aa1.95□□□□□ -2.1
HMGB3P21-201ENST00000452483 CACNA1BQ00975 2339 aa1.95□□□□□ -2.1
HMGB3P21-201ENST00000452483 TNCP24821 2201 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 ASXL3Q9C0F0 2248 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 FAM208AQ9UK61 1670 aaKnown RBP1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 I3L3M4 83 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 MRPL33O75394 65 aaKnown RBP1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 TULP4Q9NRJ4 1543 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 USP24Q9UPU5 2620 aa1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 DDX60LQ5H9U9 1706 aaKnown RBP1.94□□□□□ -2.1
HMGB3P21-201ENST00000452483 SMIM27A0A1W2PRY6 76 aa1.93□□□□□ -2.1
HMGB3P21-201ENST00000452483 IGIPA6NJ69 53 aa1.93□□□□□ -2.1
HMGB3P21-201ENST00000452483 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
HMGB3P21-201ENST00000452483 TECTAO75443 2155 aa1.92□□□□□ -2.1
HMGB3P21-201ENST00000452483 URB1O60287 2271 aaKnown RBP1.91□□□□□ -2.1
HMGB3P21-201ENST00000452483 TIMM8BQ9Y5J9 83 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P21-201ENST00000452483 ANKRD17O75179 2603 aaKnown RBP1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 DEFB131BA0A096LNP1 70 aa1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 DEFB119Q8N690 84 aa1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 USMG5Q96IX5 58 aa1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 TP53AIP1Q9HCN2 124 aa1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 TRPM2O94759 1503 aa1.89□□□□□ -2.11
HMGB3P21-201ENST00000452483 COX6B1P14854 86 aa1.88□□□□□ -2.11
HMGB3P21-201ENST00000452483 PIGYQ3MUY2 71 aa1.88□□□□□ -2.11
HMGB3P21-201ENST00000452483 AHCTF1Q8WYP5 2266 aa1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 H0YGX0 51 aa1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 K7EIL1 84 aa1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 ZDBF2Q9HCK1 2354 aa1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 KNTC1P50748 2209 aa1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 GOLGA4Q13439 2230 aaKnown RBP1.87□□□□□ -2.11
HMGB3P21-201ENST00000452483 CRIP1P50238 77 aa1.86□□□□□ -2.11
HMGB3P21-201ENST00000452483 SPINK4O60575 86 aa1.85□□□□□ -2.11
HMGB3P21-201ENST00000452483 KRTAP10-10P60014 251 aa1.85□□□□□ -2.11
HMGB3P21-201ENST00000452483 TOGARAM1Q9Y4F4 1720 aa1.85□□□□□ -2.11
HMGB3P21-201ENST00000452483 DEPDC5O75140 1603 aa1.84□□□□□ -2.11
HMGB3P21-201ENST00000452483 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
HMGB3P21-201ENST00000452483 I3L2K1 104 aa1.84□□□□□ -2.11
HMGB3P21-201ENST00000452483 MRPL34Q9BQ48 92 aaKnown RBP1.84□□□□□ -2.11
HMGB3P21-201ENST00000452483 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms