RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 A0A087WZ39 114 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 HERVK_113P63121 156 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 COX6A2Q02221 97 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 LINC00526Q96FQ7 95 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 CAMK2N2Q96S95 79 aa5.72□□□□□ -1.49
COL8A1-203ENST00000452013 GEMIN7Q9H840 131 aaKnown RBP5.72□□□□□ -1.49
COL8A1-203ENST00000452013 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 CFC1BP0CG36 223 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 CFC1P0CG37 223 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
COL8A1-203ENST00000452013 CARD19Q96LW7 228 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 SIGMAR1Q99720 223 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 ERG28Q9UKR5 140 aa5.71□□□□□ -1.5
COL8A1-203ENST00000452013 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 SMR3BP02814 79 aaPredicted RBP5.7□□□□□ -1.5
COL8A1-203ENST00000452013 COX6CP09669 75 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 SCGB1C2P0DMR2 95 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 SCXQ7RTU7 201 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 TEN1Q86WV5 123 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 PPDPFLQ8WWR9 84 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 LINC00474Q9P2X8 69 aa5.7□□□□□ -1.5
COL8A1-203ENST00000452013 A4D1N5 150 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 NDUFA1O15239 70 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 PRSS2P07478 247 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 PSMB2P49721 201 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 HAMPP81172 84 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 ATXN8Q156A1 80 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 SFTA2Q6UW10 78 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 Q6ZRU5 148 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
COL8A1-203ENST00000452013 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 HERV-K104P63124 156 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 ETDBQ3ZM63 59 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 MTURNQ8N3F0 131 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 CDKN2A-AS1Q9UH64 79 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
COL8A1-203ENST00000452013 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
COL8A1-203ENST00000452013 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 CKS1BP61024 79 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 KIAA0087Q14695 138 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 TOMM7Q9P0U1 55 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
COL8A1-203ENST00000452013 IGKV2-24A0A0C4DH68 120 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 TCL1BO95988 128 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
COL8A1-203ENST00000452013 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 Q5VSD8 79 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 Q8IZM0 81 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 LINC00528Q8N1L1 170 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 LITAFQ99732 161 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 HERC2O95714 4834 aa5.66□□□□□ -1.5
COL8A1-203ENST00000452013 A0A087WYN8 130 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 H3BT86 120 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 PANO1I0J062 215 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 CHTF8P0CG12 524 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 Q1RN00 199 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 PLAC8Q9NZF1 115 aa5.65□□□□□ -1.5
COL8A1-203ENST00000452013 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
COL8A1-203ENST00000452013 A0A096LNI7 61 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 SLC25A20O43772 301 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 RPL13AP40429 203 aaKnown RBP5.64□□□□□ -1.51
COL8A1-203ENST00000452013 CXCL5P42830 114 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 C10orf25Q5T742 122 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
COL8A1-203ENST00000452013 HSPG2P98160 4391 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
COL8A1-203ENST00000452013 RPL18AQ02543 176 aaKnown RBP5.63□□□□□ -1.51
COL8A1-203ENST00000452013 C21orf62-AS1Q17RA5 79 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 C2orf82Q6UX34 121 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 COX7B2Q8TF08 81 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 C6orf48Q9UBA6 75 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 RYR1P21817 5038 aa5.63□□□□□ -1.51
COL8A1-203ENST00000452013 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
COL8A1-203ENST00000452013 A0A1B0GV72 72 aa5.62□□□□□ -1.51
COL8A1-203ENST00000452013 SPINK8P0C7L1 97 aa5.62□□□□□ -1.51
COL8A1-203ENST00000452013 C9JAW5 83 aa5.61□□□□□ -1.51
COL8A1-203ENST00000452013 NDUFC2-KCTD14E9PQ53 114 aa5.61□□□□□ -1.51
COL8A1-203ENST00000452013 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
COL8A1-203ENST00000452013 TRAV13-2A0A0B4J235 113 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms