RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 CEP295Q9C0D2 2601 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 FHL3Q13643 280 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 C5orf42Q9H799 3197 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 KLK9Q2XQG4 91 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
ITGB4-202ENST00000449880 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
ITGB4-202ENST00000449880 ELOF1P60002 83 aaKnown RBP9.69□□□□□ -0.86
ITGB4-202ENST00000449880 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
ITGB4-202ENST00000449880 ANKRD11Q6UB99 2663 aaPredicted RBP9.68□□□□□ -0.86
ITGB4-202ENST00000449880 IGHV6-1A0A0B4J1U7 121 aa9.67□□□□□ -0.86
ITGB4-202ENST00000449880 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
ITGB4-202ENST00000449880 COL27A1Q8IZC6 1860 aaPredicted RBP9.67□□□□□ -0.86
ITGB4-202ENST00000449880 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
ITGB4-202ENST00000449880 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
ITGB4-202ENST00000449880 AGRNO00468 2067 aa9.64□□□□□ -0.87
ITGB4-202ENST00000449880 A8MTW9 85 aa9.64□□□□□ -0.87
ITGB4-202ENST00000449880 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
ITGB4-202ENST00000449880 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
ITGB4-202ENST00000449880 ZFYVE26Q68DK2 2539 aa9.62□□□□□ -0.87
ITGB4-202ENST00000449880 Q6ZRU5 148 aa9.62□□□□□ -0.87
ITGB4-202ENST00000449880 Q8NBF4 154 aa9.61□□□□□ -0.87
ITGB4-202ENST00000449880 ACYP2P14621 99 aa9.6□□□□□ -0.87
ITGB4-202ENST00000449880 WIPF1O43516 503 aa9.6□□□□□ -0.87
ITGB4-202ENST00000449880 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
ITGB4-202ENST00000449880 ABCA12Q86UK0 2595 aa9.59□□□□□ -0.87
ITGB4-202ENST00000449880 VPREB1P12018 145 aa9.59□□□□□ -0.87
ITGB4-202ENST00000449880 A0A1B0GU69 56 aa9.59□□□□□ -0.87
ITGB4-202ENST00000449880 SPAG11AQ6PDA7 123 aa9.59□□□□□ -0.87
ITGB4-202ENST00000449880 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
ITGB4-202ENST00000449880 X6R8D5 127 aa9.58□□□□□ -0.88
ITGB4-202ENST00000449880 CD164Q04900 197 aa9.58□□□□□ -0.88
ITGB4-202ENST00000449880 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
ITGB4-202ENST00000449880 C8orf87E5RJ46 101 aa9.56□□□□□ -0.88
ITGB4-202ENST00000449880 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
ITGB4-202ENST00000449880 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
ITGB4-202ENST00000449880 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
ITGB4-202ENST00000449880 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
ITGB4-202ENST00000449880 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
ITGB4-202ENST00000449880 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
ITGB4-202ENST00000449880 IGLV6-57P01721 117 aa9.53□□□□□ -0.88
ITGB4-202ENST00000449880 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.88
ITGB4-202ENST00000449880 PRLHP81277 87 aa9.52□□□□□ -0.88
ITGB4-202ENST00000449880 Q6ZRX8 168 aa9.52□□□□□ -0.89
ITGB4-202ENST00000449880 Q9UF83 564 aa9.52□□□□□ -0.89
ITGB4-202ENST00000449880 USP9XQ93008 2570 aaPredicted RBP9.52□□□□□ -0.89
ITGB4-202ENST00000449880 H7BZZ5 65 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 TRANK1O15050 2925 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 SPINK1P00995 79 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 H3BNG1 76 aa9.51□□□□□ -0.89
ITGB4-202ENST00000449880 SPTBN4Q9H254 2564 aa9.5□□□□□ -0.89
ITGB4-202ENST00000449880 MDFIQ99750 246 aa9.5□□□□□ -0.89
ITGB4-202ENST00000449880 BRCA2P51587 3418 aa9.5□□□□□ -0.89
ITGB4-202ENST00000449880 MKI67P46013 3256 aaKnown RBP9.5□□□□□ -0.89
ITGB4-202ENST00000449880 TLN2Q9Y4G6 2542 aa9.49□□□□□ -0.89
ITGB4-202ENST00000449880 CHD8Q9HCK8 2581 aa9.49□□□□□ -0.89
ITGB4-202ENST00000449880 MOBPQ13875 183 aa9.47□□□□□ -0.89
ITGB4-202ENST00000449880 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
ITGB4-202ENST00000449880 LINC00476Q8WZB0 136 aa9.47□□□□□ -0.89
ITGB4-202ENST00000449880 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
ITGB4-202ENST00000449880 RANBP2P49792 3224 aaKnown RBP9.46□□□□□ -0.9
ITGB4-202ENST00000449880 A8MUN3 132 aa9.45□□□□□ -0.9
ITGB4-202ENST00000449880 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
ITGB4-202ENST00000449880 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
ITGB4-202ENST00000449880 COA5Q86WW8 74 aa9.43□□□□□ -0.9
ITGB4-202ENST00000449880 ZNF462Q96JM2 2506 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 PRR15Q8IV56 129 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 IGKV2-30P06310 120 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 A8MWP4 228 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 MUC4Q99102 2169 aa9.42□□□□□ -0.9
ITGB4-202ENST00000449880 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
ITGB4-202ENST00000449880 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
ITGB4-202ENST00000449880 LAMA3Q16787 3333 aa9.39□□□□□ -0.91
ITGB4-202ENST00000449880 A0A096LNT2 108 aa9.39□□□□□ -0.91
ITGB4-202ENST00000449880 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
ITGB4-202ENST00000449880 USP9YO00507 2555 aaPredicted RBP9.38□□□□□ -0.91
ITGB4-202ENST00000449880 SETD2Q9BYW2 2564 aaPredicted RBP9.37□□□□□ -0.91
ITGB4-202ENST00000449880 K7EQZ3 153 aa9.37□□□□□ -0.91
ITGB4-202ENST00000449880 PKD1L2Q7Z442 2459 aa9.37□□□□□ -0.91
ITGB4-202ENST00000449880 LCA10Q71F78 164 aa9.37□□□□□ -0.91
ITGB4-202ENST00000449880 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
ITGB4-202ENST00000449880 KCNQ1DNQ9H478 68 aa9.36□□□□□ -0.91
ITGB4-202ENST00000449880 SPANXA2-OT1Q8N9U9 137 aa9.36□□□□□ -0.91
ITGB4-202ENST00000449880 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
ITGB4-202ENST00000449880 KRTAP24-1Q3LI83 254 aa9.34□□□□□ -0.91
ITGB4-202ENST00000449880 Q6ZRP5 223 aa9.34□□□□□ -0.91
ITGB4-202ENST00000449880 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
ITGB4-202ENST00000449880 PRRC2CQ9Y520 2896 aaKnown RBP9.33□□□□□ -0.92
ITGB4-202ENST00000449880 UQCR11O14957 56 aa9.32□□□□□ -0.92
ITGB4-202ENST00000449880 RTL8CO15255 209 aa9.32□□□□□ -0.92
ITGB4-202ENST00000449880 ST20-AS1Q8NBB2 130 aa9.31□□□□□ -0.92
ITGB4-202ENST00000449880 Q1T7F1 81 aa9.31□□□□□ -0.92
ITGB4-202ENST00000449880 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
ITGB4-202ENST00000449880 ANKRD17O75179 2603 aaKnown RBP9.3□□□□□ -0.92
ITGB4-202ENST00000449880 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
ITGB4-202ENST00000449880 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 392 ms