RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 Q8N3U1 123 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 CCL24O00175 119 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 ESRGQ1W209 222 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 A0A087WZ39 114 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 ODF3L2Q3SX64 289 aa9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 CCDC168Q8NDH2 2452 aa9.35□□□□□ -0.91
SYNGAP1-204ENST00000449372 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
SYNGAP1-204ENST00000449372 Q8N814 137 aa9.35□□□□□ -0.91
SYNGAP1-204ENST00000449372 SORL1Q92673 2214 aa9.35□□□□□ -0.91
SYNGAP1-204ENST00000449372 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
SYNGAP1-204ENST00000449372 PRM2P04554 102 aa9.34□□□□□ -0.91
SYNGAP1-204ENST00000449372 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
SYNGAP1-204ENST00000449372 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
SYNGAP1-204ENST00000449372 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
SYNGAP1-204ENST00000449372 Q6ZRU5 148 aa9.33□□□□□ -0.92
SYNGAP1-204ENST00000449372 Q6ZVQ6 151 aa9.33□□□□□ -0.92
SYNGAP1-204ENST00000449372 ACANP16112 2415 aa9.33□□□□□ -0.92
SYNGAP1-204ENST00000449372 SMR3AQ99954 134 aa9.32□□□□□ -0.92
SYNGAP1-204ENST00000449372 NREPQ16612 68 aa9.32□□□□□ -0.92
SYNGAP1-204ENST00000449372 Q6ZQT0 140 aa9.32□□□□□ -0.92
SYNGAP1-204ENST00000449372 Q8IZM0 81 aa9.31□□□□□ -0.92
SYNGAP1-204ENST00000449372 PDE6GP18545 87 aa9.31□□□□□ -0.92
SYNGAP1-204ENST00000449372 COX17Q14061 63 aa9.31□□□□□ -0.92
SYNGAP1-204ENST00000449372 SETXQ7Z333 2677 aaKnown RBP9.31□□□□□ -0.92
SYNGAP1-204ENST00000449372 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
SYNGAP1-204ENST00000449372 LY6G6DO95868 133 aa9.3□□□□□ -0.92
SYNGAP1-204ENST00000449372 M0R2N4 97 aa9.3□□□□□ -0.92
SYNGAP1-204ENST00000449372 FUSP35637 526 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNGAP1-204ENST00000449372 CXCL6P80162 114 aa9.3□□□□□ -0.92
SYNGAP1-204ENST00000449372 KRTAP10-3P60369 221 aa9.29□□□□□ -0.92
SYNGAP1-204ENST00000449372 FASNP49327 2511 aaKnown RBP9.28□□□□□ -0.92
SYNGAP1-204ENST00000449372 LINC00959A0A1B0GUT2 108 aa9.28□□□□□ -0.92
SYNGAP1-204ENST00000449372 SCXQ7RTU7 201 aa9.27□□□□□ -0.92
SYNGAP1-204ENST00000449372 C19orf73Q9NVV2 129 aa9.27□□□□□ -0.92
SYNGAP1-204ENST00000449372 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
SYNGAP1-204ENST00000449372 BPY2O14599 106 aa9.26□□□□□ -0.93
SYNGAP1-204ENST00000449372 PRYO14603 147 aa9.26□□□□□ -0.93
SYNGAP1-204ENST00000449372 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
SYNGAP1-204ENST00000449372 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
SYNGAP1-204ENST00000449372 LOC110117498A0A087WWA1 95 aa9.25□□□□□ -0.93
SYNGAP1-204ENST00000449372 Q6ZTC4 211 aa9.25□□□□□ -0.93
SYNGAP1-204ENST00000449372 LRCOL1A6NCL2 159 aa9.24□□□□□ -0.93
SYNGAP1-204ENST00000449372 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
SYNGAP1-204ENST00000449372 PRO0255Q9UI72 69 aa9.24□□□□□ -0.93
SYNGAP1-204ENST00000449372 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-204ENST00000449372 GYPEP15421 78 aa9.23□□□□□ -0.93
SYNGAP1-204ENST00000449372 MTORP42345 2549 aa9.23□□□□□ -0.93
SYNGAP1-204ENST00000449372 NANOS2P60321 138 aaKnown RBP9.23□□□□□ -0.93
SYNGAP1-204ENST00000449372 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
SYNGAP1-204ENST00000449372 IGLV4-60A0A075B6I1 120 aa9.22□□□□□ -0.93
SYNGAP1-204ENST00000449372 DEFB130BP0DP73 79 aa9.22□□□□□ -0.93
SYNGAP1-204ENST00000449372 DEFB130AP0DP74 79 aa9.22□□□□□ -0.93
SYNGAP1-204ENST00000449372 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
SYNGAP1-204ENST00000449372 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
SYNGAP1-204ENST00000449372 PSPHP1O15172 72 aa9.21□□□□□ -0.94
SYNGAP1-204ENST00000449372 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
SYNGAP1-204ENST00000449372 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
SYNGAP1-204ENST00000449372 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
SYNGAP1-204ENST00000449372 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
SYNGAP1-204ENST00000449372 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
SYNGAP1-204ENST00000449372 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 Q6ZRP5 223 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 Q1T7F1 81 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 WFDC10AQ9H1F0 79 aa9.19□□□□□ -0.94
SYNGAP1-204ENST00000449372 HIGD2AQ9BW72 106 aa9.18□□□□□ -0.94
SYNGAP1-204ENST00000449372 VWFP04275 2813 aa9.18□□□□□ -0.94
SYNGAP1-204ENST00000449372 hDV103S1A0JD37 113 aa9.18□□□□□ -0.94
SYNGAP1-204ENST00000449372 LINC00575Q6W349 94 aa9.17□□□□□ -0.94
SYNGAP1-204ENST00000449372 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-204ENST00000449372 INAFM1C9JVW0 142 aa9.16□□□□□ -0.94
SYNGAP1-204ENST00000449372 SETD2Q9BYW2 2564 aaPredicted RBP9.15□□□□□ -0.94
SYNGAP1-204ENST00000449372 C9orf66Q5T8R8 295 aa9.15□□□□□ -0.94
SYNGAP1-204ENST00000449372 OCR1Q9BZK8 76 aa9.15□□□□□ -0.94
SYNGAP1-204ENST00000449372 HIVEP1P15822 2718 aa9.15□□□□□ -0.94
SYNGAP1-204ENST00000449372 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.94
SYNGAP1-204ENST00000449372 HIVEP2P31629 2446 aa9.15□□□□□ -0.95
SYNGAP1-204ENST00000449372 SPATA3Q8NHX4 192 aa9.15□□□□□ -0.95
SYNGAP1-204ENST00000449372 CHCHD10Q8WYQ3 142 aaPredicted RBP9.15□□□□□ -0.95
SYNGAP1-204ENST00000449372 Q8N9L7 120 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 APOC4P55056 127 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 KTN1-AS1Q86SY8 53 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 SPTSSBQ8NFR3 76 aa9.14□□□□□ -0.95
SYNGAP1-204ENST00000449372 REG3AQ06141 175 aa9.13□□□□□ -0.95
SYNGAP1-204ENST00000449372 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
SYNGAP1-204ENST00000449372 DIRC1Q969H9 104 aa9.12□□□□□ -0.95
SYNGAP1-204ENST00000449372 C1orf64Q8NEQ6 169 aa9.12□□□□□ -0.95
SYNGAP1-204ENST00000449372 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
SYNGAP1-204ENST00000449372 UBE2BP63146 152 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 Q6ZQY7 126 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 LINC00269Q8N2A0 174 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 LINC00612Q8N6U2 182 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 TRRAPQ9Y4A5 3859 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 CMYA5Q8N3K9 4069 aa9.11□□□□□ -0.95
SYNGAP1-204ENST00000449372 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms