RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
APP-210ENST00000448850 A0A1B0GVY2 172 aa9.35□□□□□ -0.91
APP-210ENST00000448850 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
APP-210ENST00000448850 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
APP-210ENST00000448850 NPC2P61916 151 aa9.35□□□□□ -0.91
APP-210ENST00000448850 GAGE2BQ13066 116 aa9.35□□□□□ -0.91
APP-210ENST00000448850 GCSHP23434 173 aa9.34□□□□□ -0.91
APP-210ENST00000448850 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
APP-210ENST00000448850 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
APP-210ENST00000448850 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
APP-210ENST00000448850 A0A096LNI7 61 aa9.33□□□□□ -0.92
APP-210ENST00000448850 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
APP-210ENST00000448850 IFITM1P13164 125 aa9.33□□□□□ -0.92
APP-210ENST00000448850 TAL2Q16559 108 aa9.33□□□□□ -0.92
APP-210ENST00000448850 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
APP-210ENST00000448850 SOSTDC1Q6X4U4 206 aa9.33□□□□□ -0.92
APP-210ENST00000448850 MUSTN1Q8IVN3 82 aa9.33□□□□□ -0.92
APP-210ENST00000448850 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
APP-210ENST00000448850 K7ERU9 68 aa9.32□□□□□ -0.92
APP-210ENST00000448850 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
APP-210ENST00000448850 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
APP-210ENST00000448850 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
APP-210ENST00000448850 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
APP-210ENST00000448850 HSD52Q0P140 79 aa9.31□□□□□ -0.92
APP-210ENST00000448850 C9orf129Q5T035 196 aaKnown RBP9.31□□□□□ -0.92
APP-210ENST00000448850 TSPAN13O95857 204 aa9.31□□□□□ -0.92
APP-210ENST00000448850 SNHG12Q9BXW3 62 aa9.31□□□□□ -0.92
APP-210ENST00000448850 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
APP-210ENST00000448850 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
APP-210ENST00000448850 CEND1Q8N111 149 aa9.29□□□□□ -0.92
APP-210ENST00000448850 LINC00474Q9P2X8 69 aa9.29□□□□□ -0.92
APP-210ENST00000448850 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
APP-210ENST00000448850 PANO1I0J062 215 aa9.27□□□□□ -0.93
APP-210ENST00000448850 M0QXV9 152 aa9.27□□□□□ -0.93
APP-210ENST00000448850 KRTAP10-1P60331 282 aa9.27□□□□□ -0.93
APP-210ENST00000448850 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
APP-210ENST00000448850 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
APP-210ENST00000448850 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
APP-210ENST00000448850 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
APP-210ENST00000448850 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
APP-210ENST00000448850 Q8NDZ9 215 aa9.26□□□□□ -0.93
APP-210ENST00000448850 NDUFC2O95298 119 aa9.25□□□□□ -0.93
APP-210ENST00000448850 FXYD2P54710 66 aa9.25□□□□□ -0.93
APP-210ENST00000448850 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
APP-210ENST00000448850 VPREB1P12018 145 aa9.24□□□□□ -0.93
APP-210ENST00000448850 HINT1P49773 126 aaPredicted RBP9.24□□□□□ -0.93
APP-210ENST00000448850 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
APP-210ENST00000448850 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
APP-210ENST00000448850 UBE2V1Q13404 147 aa9.24□□□□□ -0.93
APP-210ENST00000448850 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
APP-210ENST00000448850 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
APP-210ENST00000448850 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
APP-210ENST00000448850 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
APP-210ENST00000448850 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
APP-210ENST00000448850 Q6ZSA8 131 aa9.22□□□□□ -0.93
APP-210ENST00000448850 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
APP-210ENST00000448850 IGLV5-37A0A075B6J1 123 aa9.21□□□□□ -0.93
APP-210ENST00000448850 A0A087WYN8 130 aa9.21□□□□□ -0.93
APP-210ENST00000448850 SEC61GP60059 68 aa9.21□□□□□ -0.93
APP-210ENST00000448850 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
APP-210ENST00000448850 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
APP-210ENST00000448850 NCR3O14931 201 aa9.21□□□□□ -0.94
APP-210ENST00000448850 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
APP-210ENST00000448850 COL5A1-AS1Q5SY13 56 aa9.21□□□□□ -0.94
APP-210ENST00000448850 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
APP-210ENST00000448850 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
APP-210ENST00000448850 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
APP-210ENST00000448850 CFC1P0CG37 223 aa9.19□□□□□ -0.94
APP-210ENST00000448850 NHP2Q9NX24 153 aaKnown RBP9.19□□□□□ -0.94
APP-210ENST00000448850 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
APP-210ENST00000448850 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
APP-210ENST00000448850 M0R378 163 aa9.19□□□□□ -0.94
APP-210ENST00000448850 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
APP-210ENST00000448850 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
APP-210ENST00000448850 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
APP-210ENST00000448850 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
APP-210ENST00000448850 BATFQ16520 125 aa9.17□□□□□ -0.94
APP-210ENST00000448850 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
APP-210ENST00000448850 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
APP-210ENST00000448850 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
APP-210ENST00000448850 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
APP-210ENST00000448850 RAB37Q96AX2 223 aa9.17□□□□□ -0.94
APP-210ENST00000448850 A0A1B0GWB2 263 aa9.16□□□□□ -0.94
APP-210ENST00000448850 A6NDN8 102 aa9.16□□□□□ -0.94
APP-210ENST00000448850 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
APP-210ENST00000448850 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
APP-210ENST00000448850 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
APP-210ENST00000448850 S100A7L2Q5SY68 101 aa9.15□□□□□ -0.94
APP-210ENST00000448850 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
APP-210ENST00000448850 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
APP-210ENST00000448850 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
APP-210ENST00000448850 TMEM126AQ9H061 195 aa9.15□□□□□ -0.95
APP-210ENST00000448850 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
APP-210ENST00000448850 K7ERJ3 54 aa9.14□□□□□ -0.95
APP-210ENST00000448850 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
APP-210ENST00000448850 PRO1854Q9UHT4 67 aa9.14□□□□□ -0.95
APP-210ENST00000448850 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
APP-210ENST00000448850 HAMPP81172 84 aa9.12□□□□□ -0.95
APP-210ENST00000448850 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
APP-210ENST00000448850 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms