RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 TLN2Q9Y4G6 2542 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 JMJD1CQ15652 2540 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 CCL24O00175 119 aa6.35□□□□□ -1.39
SYNPO2-204ENST00000448416 MYO9AB2RTY4 2548 aa6.35□□□□□ -1.39
SYNPO2-204ENST00000448416 HIGD2BQ4VC39 106 aa6.35□□□□□ -1.39
SYNPO2-204ENST00000448416 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-204ENST00000448416 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
SYNPO2-204ENST00000448416 C3orf84H3BNL1 204 aa6.34□□□□□ -1.39
SYNPO2-204ENST00000448416 ANGP03950 147 aaKnown RBP6.34□□□□□ -1.39
SYNPO2-204ENST00000448416 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
SYNPO2-204ENST00000448416 KLK12Q9UKR0 248 aa6.34□□□□□ -1.39
SYNPO2-204ENST00000448416 SPAG11BQ08648 103 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 OXLD1Q5BKU9 147 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 RETNQ9HD89 108 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 ITPR1Q14643 2758 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 CD164Q04900 197 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 WFDC10AQ9H1F0 79 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 REG3AQ06141 175 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
SYNPO2-204ENST00000448416 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 CYSRT1A8MQ03 144 aa6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 Q6YL49 198 aa6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
SYNPO2-204ENST00000448416 PRR4Q16378 134 aa6.31□□□□□ -1.4
SYNPO2-204ENST00000448416 FN1P02751 2386 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-204ENST00000448416 MAPK1IP1LQ8NDC0 245 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 IGF2RP11717 2491 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 PRB2P02812 416 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 CELSR2Q9HCU4 2923 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 USP9YO00507 2555 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 A0A0J9YWU9 116 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 A8MUN3 132 aa6.3□□□□□ -1.4
SYNPO2-204ENST00000448416 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
SYNPO2-204ENST00000448416 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-204ENST00000448416 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-204ENST00000448416 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
SYNPO2-204ENST00000448416 LCE6AA0A183 80 aa6.27□□□□□ -1.41
SYNPO2-204ENST00000448416 PSCAO43653 123 aa6.27□□□□□ -1.41
SYNPO2-204ENST00000448416 SYCNQ0VAF6 134 aa6.27□□□□□ -1.41
SYNPO2-204ENST00000448416 USP9XQ93008 2570 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-204ENST00000448416 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
SYNPO2-204ENST00000448416 DEFB105AQ8NG35 78 aa6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 ZANQ9Y493 2812 aa6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 A8MU10 97 aa6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
SYNPO2-204ENST00000448416 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.25□□□□□ -1.41
SYNPO2-204ENST00000448416 CYP4F30PQ9H0H9 118 aa6.25□□□□□ -1.41
SYNPO2-204ENST00000448416 C6orf48Q9UBA6 75 aa6.25□□□□□ -1.41
SYNPO2-204ENST00000448416 PTPN13Q12923 2485 aa6.25□□□□□ -1.41
SYNPO2-204ENST00000448416 UBE2BP63146 152 aa6.25□□□□□ -1.41
SYNPO2-204ENST00000448416 NBPF19A0A087WUL8 3843 aa6.24□□□□□ -1.41
SYNPO2-204ENST00000448416 SETXQ7Z333 2677 aaKnown RBP6.24□□□□□ -1.41
SYNPO2-204ENST00000448416 LYRM9A8MSI8 78 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 M0R378 163 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 DSCR9P59020 149 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 KPRPQ5T749 579 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 ESM1Q9NQ30 184 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 APCP25054 2843 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 VPREB1P12018 145 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 ST20-AS1Q8NBB2 130 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 ZFYVE26Q68DK2 2539 aa6.23□□□□□ -1.41
SYNPO2-204ENST00000448416 Q5VV11 94 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 C19orf73Q9NVV2 129 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 FBN2P35556 2912 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 NDUFB1O75438 58 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 UBE2AP49459 152 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
SYNPO2-204ENST00000448416 SETD2Q9BYW2 2564 aaPredicted RBP6.21□□□□□ -1.42
SYNPO2-204ENST00000448416 FSHBP01225 129 aa6.21□□□□□ -1.42
SYNPO2-204ENST00000448416 RBM12B-AS1Q9P1G2 102 aa6.2□□□□□ -1.42
SYNPO2-204ENST00000448416 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
SYNPO2-204ENST00000448416 Q8N377 158 aa6.2□□□□□ -1.42
SYNPO2-204ENST00000448416 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
SYNPO2-204ENST00000448416 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
SYNPO2-204ENST00000448416 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 K7EQZ3 153 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 SONP18583 2426 aaKnown RBP6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 NCOR2Q9Y618 2525 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 EPG5Q9HCE0 2579 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 A0A1B0GW54 56 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 DSCR10P59022 87 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 NIPBLQ6KC79 2804 aaeCLIP6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 AKAP9Q99996 3911 aa6.19□□□□□ -1.42
SYNPO2-204ENST00000448416 MUC6Q6W4X9 2439 aa6.18□□□□□ -1.42
SYNPO2-204ENST00000448416 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
SYNPO2-204ENST00000448416 IGLV1-51P01701 117 aa6.18□□□□□ -1.42
SYNPO2-204ENST00000448416 MP68P56378 58 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms