RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 IGLV4-60A0A075B6I1 120 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 LOC389332A0A1B0GUA5 103 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 C10orf25Q5T742 122 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 ENHOQ6UWT2 76 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 TIMM21Q9BVV7 248 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
HDAC9-216ENST00000446646 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
HDAC9-216ENST00000446646 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
HDAC9-216ENST00000446646 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
HDAC9-216ENST00000446646 Q8N8P6 123 aa4.44□□□□□ -1.7
HDAC9-216ENST00000446646 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
HDAC9-216ENST00000446646 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
HDAC9-216ENST00000446646 KIAA1644Q3SXP7 199 aa4.43□□□□□ -1.7
HDAC9-216ENST00000446646 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
HDAC9-216ENST00000446646 CDC42SE2Q9NRR3 84 aa4.43□□□□□ -1.7
HDAC9-216ENST00000446646 LINC00959A0A1B0GUT2 108 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 APOMO95445 188 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 XCL1P47992 114 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 MRPS36P82909 103 aaKnown RBP4.42□□□□□ -1.7
HDAC9-216ENST00000446646 MEIG1Q5JSS6 88 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 TEX43Q6ZNM6 134 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 TMEM141Q96I45 108 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 VAMP8Q9BV40 100 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
HDAC9-216ENST00000446646 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 hDV102S1A0JD36 115 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 COLCA2A8K830 154 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 RPL39P62891 51 aaKnown RBP4.41□□□□□ -1.7
HDAC9-216ENST00000446646 SEC11AP67812 179 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
HDAC9-216ENST00000446646 Q6ZUT4 128 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
HDAC9-216ENST00000446646 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 J3QQQ9 107 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 COX7A2LO14548 114 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 PSMB2P49721 201 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 Q6Q795 121 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 HIST3H2BBQ8N257 126 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
HDAC9-216ENST00000446646 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
HDAC9-216ENST00000446646 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
HDAC9-216ENST00000446646 RNASE13Q5GAN3 156 aaKnown RBP4.39□□□□□ -1.71
HDAC9-216ENST00000446646 TOMM6Q96B49 74 aa4.39□□□□□ -1.71
HDAC9-216ENST00000446646 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
HDAC9-216ENST00000446646 GVQW2A0A096LPI5 108 aaPredicted RBP4.38□□□□□ -1.71
HDAC9-216ENST00000446646 LINC01546A6NGU7 62 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 NDUFS5O43920 106 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 HBDP02042 147 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
HDAC9-216ENST00000446646 HERVK_113P63121 156 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 Q5XG85 94 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 C18orf32Q8TCD1 76 aa4.38□□□□□ -1.71
HDAC9-216ENST00000446646 CHCHD1Q96BP2 118 aaKnown RBP4.38□□□□□ -1.71
HDAC9-216ENST00000446646 IGHV3-64A0A075B6Q5 118 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 LOC107984640A0A0U1RRK4 108 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 PRSS1P07477 247 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
HDAC9-216ENST00000446646 KRTAP26-1Q6PEX3 210 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 SDIM1Q6ZPB5 146 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
HDAC9-216ENST00000446646 IGIPA6NJ69 53 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 E9PLD3 99 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 H0Y9J4 135 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 TRGC2P03986 189 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 PRSS2P07478 247 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 IFITM1P13164 125 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 UBE2D1P51668 147 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 TMEM258P61165 79 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 SPAG11BQ08648 103 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 HIGD2BQ4VC39 106 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 CARD19Q96LW7 228 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 AMELXQ99217 191 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
HDAC9-216ENST00000446646 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
HDAC9-216ENST00000446646 A0A087WYN8 130 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 IGHV3OR16-9A0A0B4J2B5 98 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 H3BRM9 83 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 FABP4P15090 132 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
HDAC9-216ENST00000446646 CIRBPQ14011 172 aaKnown RBP4.35□□□□□ -1.71
HDAC9-216ENST00000446646 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 C9orf163Q8N9P6 203 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
HDAC9-216ENST00000446646 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 LINC00474Q9P2X8 69 aa4.35□□□□□ -1.71
HDAC9-216ENST00000446646 IGLV4-69A0A075B6H9 119 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms