RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 Q6ZSA8 131 aa9.62□□□□□ -0.87
CCNE1-203ENST00000444983 SPANXDQ9BXN6 97 aa9.62□□□□□ -0.87
CCNE1-203ENST00000444983 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
CCNE1-203ENST00000444983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
CCNE1-203ENST00000444983 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
CCNE1-203ENST00000444983 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 SOSTDC1Q6X4U4 206 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 Q6ZVH6 145 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 FAM30AQ9NZY2 134 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
CCNE1-203ENST00000444983 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
CCNE1-203ENST00000444983 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
CCNE1-203ENST00000444983 EPM2AB3EWF7 344 aa9.59□□□□□ -0.87
CCNE1-203ENST00000444983 KRTAP7-1Q8IUC3 87 aa9.59□□□□□ -0.87
CCNE1-203ENST00000444983 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
CCNE1-203ENST00000444983 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
CCNE1-203ENST00000444983 Q8NDZ9 215 aa9.58□□□□□ -0.88
CCNE1-203ENST00000444983 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
CCNE1-203ENST00000444983 IFITM1P13164 125 aa9.57□□□□□ -0.88
CCNE1-203ENST00000444983 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
CCNE1-203ENST00000444983 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
CCNE1-203ENST00000444983 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCNE1-203ENST00000444983 NPC2P61916 151 aa9.55□□□□□ -0.88
CCNE1-203ENST00000444983 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
CCNE1-203ENST00000444983 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
CCNE1-203ENST00000444983 TAL2Q16559 108 aa9.55□□□□□ -0.88
CCNE1-203ENST00000444983 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
CCNE1-203ENST00000444983 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
CCNE1-203ENST00000444983 A0A087WYN8 130 aa9.54□□□□□ -0.88
CCNE1-203ENST00000444983 VPREB1P12018 145 aa9.54□□□□□ -0.88
CCNE1-203ENST00000444983 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
CCNE1-203ENST00000444983 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
CCNE1-203ENST00000444983 DYNC1H1Q14204 4646 aaKnown RBP9.53□□□□□ -0.88
CCNE1-203ENST00000444983 EPPK1P58107 5090 aaKnown RBP9.53□□□□□ -0.88
CCNE1-203ENST00000444983 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
CCNE1-203ENST00000444983 NDUFC2O95298 119 aa9.53□□□□□ -0.88
CCNE1-203ENST00000444983 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
CCNE1-203ENST00000444983 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
CCNE1-203ENST00000444983 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
CCNE1-203ENST00000444983 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
CCNE1-203ENST00000444983 XGP55808 180 aa9.5□□□□□ -0.89
CCNE1-203ENST00000444983 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
CCNE1-203ENST00000444983 RPL24P83731 157 aaKnown RBP9.5□□□□□ -0.89
CCNE1-203ENST00000444983 HSD52Q0P140 79 aa9.5□□□□□ -0.89
CCNE1-203ENST00000444983 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
CCNE1-203ENST00000444983 FAM19A5Q7Z5A7 132 aaPredicted RBP9.5□□□□□ -0.89
CCNE1-203ENST00000444983 CEND1Q8N111 149 aa9.5□□□□□ -0.89
CCNE1-203ENST00000444983 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
CCNE1-203ENST00000444983 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
CCNE1-203ENST00000444983 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
CCNE1-203ENST00000444983 C22orf24Q9Y442 160 aa9.49□□□□□ -0.89
CCNE1-203ENST00000444983 TMEM238LA0A1B0GVL6 79 aa9.48□□□□□ -0.89
CCNE1-203ENST00000444983 A4D1N5 150 aa9.48□□□□□ -0.89
CCNE1-203ENST00000444983 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
CCNE1-203ENST00000444983 M0QXV9 152 aa9.46□□□□□ -0.89
CCNE1-203ENST00000444983 FXYD2P54710 66 aa9.46□□□□□ -0.89
CCNE1-203ENST00000444983 MRPL55Q7Z7F7 128 aaKnown RBP9.46□□□□□ -0.89
CCNE1-203ENST00000444983 HAMPP81172 84 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 M0R378 163 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 PHF5AQ7RTV0 110 aaKnown RBP9.45□□□□□ -0.9
CCNE1-203ENST00000444983 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
CCNE1-203ENST00000444983 NCR3O14931 201 aa9.44□□□□□ -0.9
CCNE1-203ENST00000444983 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
CCNE1-203ENST00000444983 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
CCNE1-203ENST00000444983 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
CCNE1-203ENST00000444983 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 CFC1BP0CG36 223 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 CFC1P0CG37 223 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 BATFQ16520 125 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
CCNE1-203ENST00000444983 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
CCNE1-203ENST00000444983 A0A1B0GWB2 263 aa9.4□□□□□ -0.9
CCNE1-203ENST00000444983 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
CCNE1-203ENST00000444983 A6NJY4 79 aa9.4□□□□□ -0.9
CCNE1-203ENST00000444983 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
CCNE1-203ENST00000444983 HINT1P49773 126 aaPredicted RBP9.39□□□□□ -0.91
CCNE1-203ENST00000444983 RPL37AP8A6NKH3 93 aa9.39□□□□□ -0.91
CCNE1-203ENST00000444983 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
CCNE1-203ENST00000444983 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
CCNE1-203ENST00000444983 KCNQ1DNQ9H478 68 aa9.38□□□□□ -0.91
CCNE1-203ENST00000444983 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
CCNE1-203ENST00000444983 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
CCNE1-203ENST00000444983 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
CCNE1-203ENST00000444983 A6NDN8 102 aa9.36□□□□□ -0.91
CCNE1-203ENST00000444983 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
CCNE1-203ENST00000444983 SPRR1AP35321 89 aa9.35□□□□□ -0.91
CCNE1-203ENST00000444983 UBE2BP63146 152 aa9.35□□□□□ -0.91
CCNE1-203ENST00000444983 VPS25Q9BRG1 176 aa9.35□□□□□ -0.91
CCNE1-203ENST00000444983 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
CCNE1-203ENST00000444983 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
CCNE1-203ENST00000444983 K7ERU9 68 aa9.34□□□□□ -0.91
CCNE1-203ENST00000444983 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
CCNE1-203ENST00000444983 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms