RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 VPREB1P12018 145 aa8.19□□□□□ -1.1
GARNL3-208ENST00000444677 LINC00158P58513 81 aa8.19□□□□□ -1.1
GARNL3-208ENST00000444677 H0Y9J4 135 aa8.18□□□□□ -1.1
GARNL3-208ENST00000444677 DPM2O94777 84 aa8.18□□□□□ -1.1
GARNL3-208ENST00000444677 COX17Q14061 63 aa8.18□□□□□ -1.1
GARNL3-208ENST00000444677 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
GARNL3-208ENST00000444677 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
GARNL3-208ENST00000444677 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
GARNL3-208ENST00000444677 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
GARNL3-208ENST00000444677 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 LEPROTO15243 131 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 ZNF861PO60384 105 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 IGKCP01834 107 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 PLNP26678 52 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 MEIG1Q5JSS6 88 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 SFTA2Q6UW10 78 aa8.16□□□□□ -1.1
GARNL3-208ENST00000444677 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
GARNL3-208ENST00000444677 SYS1-DBNDD2H3BUS1 97 aa8.14□□□□□ -1.11
GARNL3-208ENST00000444677 BCE1O60756 84 aa8.14□□□□□ -1.11
GARNL3-208ENST00000444677 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
GARNL3-208ENST00000444677 MIR7-3HGQ8N6C7 128 aa8.14□□□□□ -1.11
GARNL3-208ENST00000444677 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
GARNL3-208ENST00000444677 MYMXA0A1B0GTQ4 84 aa8.13□□□□□ -1.11
GARNL3-208ENST00000444677 J3QQQ9 107 aa8.13□□□□□ -1.11
GARNL3-208ENST00000444677 HERV-K104P63124 156 aa8.13□□□□□ -1.11
GARNL3-208ENST00000444677 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
GARNL3-208ENST00000444677 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-208ENST00000444677 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
GARNL3-208ENST00000444677 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
GARNL3-208ENST00000444677 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
GARNL3-208ENST00000444677 ATP6V1G1O75348 118 aa8.11□□□□□ -1.11
GARNL3-208ENST00000444677 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
GARNL3-208ENST00000444677 HERVK_113P61574 105 aa8.11□□□□□ -1.11
GARNL3-208ENST00000444677 DAND5Q8N907 189 aa8.11□□□□□ -1.11
GARNL3-208ENST00000444677 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
GARNL3-208ENST00000444677 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
GARNL3-208ENST00000444677 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
GARNL3-208ENST00000444677 M0R378 163 aa8.09□□□□□ -1.11
GARNL3-208ENST00000444677 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
GARNL3-208ENST00000444677 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
GARNL3-208ENST00000444677 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
GARNL3-208ENST00000444677 E9PLD3 99 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 NCR3O14931 201 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 S100A1P23297 94 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 UBE2AP49459 152 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 PRLHP81277 87 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
GARNL3-208ENST00000444677 LINC00587B1AMM8 73 aa8.07□□□□□ -1.12
GARNL3-208ENST00000444677 NMUP48645 174 aa8.07□□□□□ -1.12
GARNL3-208ENST00000444677 KRTDAPP60985 99 aa8.07□□□□□ -1.12
GARNL3-208ENST00000444677 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
GARNL3-208ENST00000444677 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
GARNL3-208ENST00000444677 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
GARNL3-208ENST00000444677 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
GARNL3-208ENST00000444677 UBR4Q5T4S7 5183 aa8.05□□□□□ -1.12
GARNL3-208ENST00000444677 IGKV2D-26A0A0A0MRZ7 120 aa8.05□□□□□ -1.12
GARNL3-208ENST00000444677 EIF4EBP3O60516 100 aaPredicted RBP8.05□□□□□ -1.12
GARNL3-208ENST00000444677 ADAMTSL4-AS1Q5T5F5 129 aa8.05□□□□□ -1.12
GARNL3-208ENST00000444677 LOC107984156A0A0G2JMH3 177 aa8.04□□□□□ -1.12
GARNL3-208ENST00000444677 NPC2P61916 151 aa8.04□□□□□ -1.12
GARNL3-208ENST00000444677 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
GARNL3-208ENST00000444677 ARL17AQ8IVW1 177 aa8.04□□□□□ -1.12
GARNL3-208ENST00000444677 A0A087X002 238 aa8.03□□□□□ -1.12
GARNL3-208ENST00000444677 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
GARNL3-208ENST00000444677 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
GARNL3-208ENST00000444677 LITAFQ99732 161 aa8.01□□□□□ -1.13
GARNL3-208ENST00000444677 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
GARNL3-208ENST00000444677 HIST3H2BBQ8N257 126 aa8□□□□□ -1.13
GARNL3-208ENST00000444677 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
GARNL3-208ENST00000444677 ZNF815PA8K554 130 aa7.99□□□□□ -1.13
GARNL3-208ENST00000444677 PRYO14603 147 aa7.99□□□□□ -1.13
GARNL3-208ENST00000444677 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
GARNL3-208ENST00000444677 HIGD2AQ9BW72 106 aa7.99□□□□□ -1.13
GARNL3-208ENST00000444677 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
GARNL3-208ENST00000444677 SPRR1AP35321 89 aa7.98□□□□□ -1.13
GARNL3-208ENST00000444677 RPL13AP40429 203 aaKnown RBP7.98□□□□□ -1.13
GARNL3-208ENST00000444677 C20orf202A1L168 122 aa7.97□□□□□ -1.13
GARNL3-208ENST00000444677 CRYGAP11844 174 aa7.97□□□□□ -1.13
GARNL3-208ENST00000444677 DDTP30046 118 aa7.97□□□□□ -1.13
GARNL3-208ENST00000444677 HIST1H2BLQ99880 126 aa7.97□□□□□ -1.13
GARNL3-208ENST00000444677 MIEN1Q9BRT3 115 aa7.97□□□□□ -1.13
GARNL3-208ENST00000444677 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
GARNL3-208ENST00000444677 NDUFC2O95298 119 aa7.96□□□□□ -1.14
GARNL3-208ENST00000444677 LINC00308Q8TCZ7 52 aa7.96□□□□□ -1.14
GARNL3-208ENST00000444677 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
GARNL3-208ENST00000444677 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
GARNL3-208ENST00000444677 SPANXB1Q9NS25 103 aaPredicted RBP7.96□□□□□ -1.14
GARNL3-208ENST00000444677 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
GARNL3-208ENST00000444677 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
GARNL3-208ENST00000444677 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
GARNL3-208ENST00000444677 ETDCA0A1B0GVM5 59 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 TIMM17BO60830 172 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 TSPAN13O95857 204 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 S100A2P29034 98 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 PCP2Q8IVA1 136 aa7.94□□□□□ -1.14
GARNL3-208ENST00000444677 LRP2P98164 4655 aa7.93□□□□□ -1.14
GARNL3-208ENST00000444677 B5MCH6 92 aa7.93□□□□□ -1.14
GARNL3-208ENST00000444677 SNRPEP62304 92 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms