RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
UBR3-206ENST00000444475 CACNA1DQ01668 2161 aa2.2□□□□□ -2.06
UBR3-206ENST00000444475 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
UBR3-206ENST00000444475 NBEAQ8NFP9 2946 aa2.2□□□□□ -2.06
UBR3-206ENST00000444475 LRCOL1A6NCL2 159 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 NDPQ00604 133 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 LINC00322Q6ZN03 302 aaPredicted RBP2.19□□□□□ -2.06
UBR3-206ENST00000444475 WDFY4Q6ZS81 3184 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 NF1P21359 2839 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 RNASE3P12724 160 aaKnown RBP2.19□□□□□ -2.06
UBR3-206ENST00000444475 SPG11Q96JI7 2443 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 J3QRE1 110 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 K7EMI3 77 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 M0R3E3 92 aa2.19□□□□□ -2.06
UBR3-206ENST00000444475 ARFGEF3Q5TH69 2177 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 FRYQ5TBA9 3013 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 CREBBPQ92793 2442 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 DOPEY2Q9Y3R5 2298 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 IGKV3D-15A0A087WSY6 115 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 SLPIP03973 132 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 WFDC6Q9BQY6 131 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 SETD2Q9BYW2 2564 aaPredicted RBP2.18□□□□□ -2.06
UBR3-206ENST00000444475 ITPR3Q14573 2671 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 IGLV3-19P01714 112 aa2.18□□□□□ -2.06
UBR3-206ENST00000444475 TMEM263Q8WUH6 116 aaKnown RBP2.18□□□□□ -2.06
UBR3-206ENST00000444475 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
UBR3-206ENST00000444475 KRTAP29-1A8MX34 341 aaPredicted RBP2.17□□□□□ -2.06
UBR3-206ENST00000444475 C4orf3Q8WVX3 66 aa2.17□□□□□ -2.06
UBR3-206ENST00000444475 SPTBN2O15020 2390 aa2.17□□□□□ -2.06
UBR3-206ENST00000444475 DSPP15924 2871 aaKnown RBP2.17□□□□□ -2.06
UBR3-206ENST00000444475 MED13LQ71F56 2210 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 LY6EQ16553 131 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 Q96NJ1 140 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 LINC00959A0A1B0GUT2 108 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 A0A1B0GUT8 65 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 AKAP13Q12802 2813 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 SMIM27A0A1W2PRY6 76 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 SPINK14Q6IE38 97 aa2.16□□□□□ -2.06
UBR3-206ENST00000444475 UQCR11O14957 56 aa2.15□□□□□ -2.06
UBR3-206ENST00000444475 NREPQ16612 68 aa2.15□□□□□ -2.06
UBR3-206ENST00000444475 OTOGQ6ZRI0 2925 aa2.15□□□□□ -2.06
UBR3-206ENST00000444475 ABRACLQ9P1F3 81 aa2.15□□□□□ -2.06
UBR3-206ENST00000444475 XIRP2A4UGR9 3374 aa2.15□□□□□ -2.06
UBR3-206ENST00000444475 USP9YO00507 2555 aaPredicted RBP2.15□□□□□ -2.07
UBR3-206ENST00000444475 R4GMQ9 66 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 V9GYV3 84 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 F8P00451 2351 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 IGKV2-40A0A087WW87 121 aaPredicted RBP2.15□□□□□ -2.07
UBR3-206ENST00000444475 LINC01546A6NGU7 62 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 IGKV2D-40P01614 121 aaPredicted RBP2.15□□□□□ -2.07
UBR3-206ENST00000444475 PRH1P02810 166 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 PTPRQQ9UMZ3 2332 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 POLQO75417 2590 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 INTS1Q8N201 2190 aaKnown RBP2.15□□□□□ -2.07
UBR3-206ENST00000444475 DNAJC13O75165 2243 aa2.15□□□□□ -2.07
UBR3-206ENST00000444475 MYO15AQ9UKN7 3530 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 RP1P56715 2156 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 KRTAP11-1Q8IUC1 163 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 URB1O60287 2271 aaKnown RBP2.14□□□□□ -2.07
UBR3-206ENST00000444475 TRAV21A0A0B4J279 112 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 HIVEP3Q5T1R4 2406 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 ABCA4P78363 2273 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 IGKV2D-30A0A075B6S6 120 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 JMJD7-PLA2G4BH0Y9G9 81 aa2.14□□□□□ -2.07
UBR3-206ENST00000444475 ASXL3Q9C0F0 2248 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 NBPF19A0A087WUL8 3843 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 H0Y9P7 68 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 FXYD3Q14802 87 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 LINC00304Q8N9R0 145 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 APC2O95996 2303 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 DMDP11532 3685 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 UNC13CQ8NB66 2214 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 COX6B1P14854 86 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 CAV3P56539 151 aa2.13□□□□□ -2.07
UBR3-206ENST00000444475 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
UBR3-206ENST00000444475 ASCC3Q8N3C0 2202 aaKnown RBP2.12□□□□□ -2.07
UBR3-206ENST00000444475 LOC110117498A0A087WWA1 95 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 C5orf56Q8N8D9 126 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 TLN1Q9Y490 2541 aaKnown RBP2.12□□□□□ -2.07
UBR3-206ENST00000444475 AKAP9Q99996 3911 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 ANK2Q01484 3957 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 ACACAQ13085 2346 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 KALRNO60229 2985 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 IGIPA6NJ69 53 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 MGPP08493 103 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 ENHOQ6UWT2 76 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 PDZD2O15018 2839 aa2.12□□□□□ -2.07
UBR3-206ENST00000444475 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 SMG1Q96Q15 3661 aaKnown RBP2.11□□□□□ -2.07
UBR3-206ENST00000444475 NDUFB1O75438 58 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 HIVEP1P15822 2718 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 C10orf55Q5SWW7 151 aa2.11□□□□□ -2.07
UBR3-206ENST00000444475 KLK9Q9UKQ9 250 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms