RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 CAMK2N2Q96S95 79 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 M0R2N4 97 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 IFITM1P13164 125 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 C10orf25Q5T742 122 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 MIR7-3HGQ8N6C7 128 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 COPS9Q8WXC6 57 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 LECT2O14960 151 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 LY6G6CO95867 125 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
SMPD4P1-203ENST00000443839 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
SMPD4P1-203ENST00000443839 COX17Q14061 63 aa6.27□□□□□ -1.41
SMPD4P1-203ENST00000443839 TEN1Q86WV5 123 aa6.27□□□□□ -1.41
SMPD4P1-203ENST00000443839 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
SMPD4P1-203ENST00000443839 Q6ZRU5 148 aa6.26□□□□□ -1.41
SMPD4P1-203ENST00000443839 C6orf48Q9UBA6 75 aa6.26□□□□□ -1.41
SMPD4P1-203ENST00000443839 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 CARD19Q96LW7 228 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 SYCNQ0VAF6 134 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 SOSTDC1Q6X4U4 206 aa6.25□□□□□ -1.41
SMPD4P1-203ENST00000443839 H7C2G1 150 aa6.24□□□□□ -1.41
SMPD4P1-203ENST00000443839 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
SMPD4P1-203ENST00000443839 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
SMPD4P1-203ENST00000443839 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 SLC25A20O43772 301 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 Q1RN00 199 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 Q6ZR54 194 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 PPDPFQ9H3Y8 114 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
SMPD4P1-203ENST00000443839 C9JAW5 83 aa6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 TRIAP1O43715 76 aa6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 C14orf177Q52M58 125 aa6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 LINC01600Q96MT4 127 aa6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
SMPD4P1-203ENST00000443839 NDUFC2-KCTD14E9PQ53 114 aa6.21□□□□□ -1.42
SMPD4P1-203ENST00000443839 SLPIP03973 132 aa6.21□□□□□ -1.42
SMPD4P1-203ENST00000443839 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
SMPD4P1-203ENST00000443839 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
SMPD4P1-203ENST00000443839 XAGE1AQ9HD64 81 aa6.2□□□□□ -1.42
SMPD4P1-203ENST00000443839 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 LRCOL1A6NCL2 159 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 XGP55808 180 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 SMIM20Q8N5G0 67 aa6.19□□□□□ -1.42
SMPD4P1-203ENST00000443839 H3BS24 57 aa6.18□□□□□ -1.42
SMPD4P1-203ENST00000443839 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
SMPD4P1-203ENST00000443839 RPL13AP40429 203 aaKnown RBP6.18□□□□□ -1.42
SMPD4P1-203ENST00000443839 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
SMPD4P1-203ENST00000443839 Q6ZRP5 223 aa6.18□□□□□ -1.42
SMPD4P1-203ENST00000443839 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 COX6CP09669 75 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 NDUFC2O95298 119 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 TLX1NBP0CAT3 122 aa6.17□□□□□ -1.42
SMPD4P1-203ENST00000443839 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 A0A087WTM6 91 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 H3BT86 120 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 LST1O00453 97 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 NCR3O14931 201 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 Q8N814 137 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 OR13C6PQ8NH95 151 aa6.16□□□□□ -1.42
SMPD4P1-203ENST00000443839 GAGE2BQ13066 116 aa6.15□□□□□ -1.42
SMPD4P1-203ENST00000443839 Q8NDZ9 215 aa6.15□□□□□ -1.42
SMPD4P1-203ENST00000443839 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
SMPD4P1-203ENST00000443839 DNAH2Q9P225 4427 aa6.15□□□□□ -1.43
SMPD4P1-203ENST00000443839 TEX49A0A1B0GTD5 131 aa6.14□□□□□ -1.43
SMPD4P1-203ENST00000443839 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
SMPD4P1-203ENST00000443839 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
SMPD4P1-203ENST00000443839 S100A7L2Q5SY68 101 aa6.13□□□□□ -1.43
SMPD4P1-203ENST00000443839 V9GYY9 64 aa6.13□□□□□ -1.43
SMPD4P1-203ENST00000443839 VPREB1P12018 145 aa6.12□□□□□ -1.43
SMPD4P1-203ENST00000443839 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
SMPD4P1-203ENST00000443839 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
SMPD4P1-203ENST00000443839 IGKV2-24A0A0C4DH68 120 aa6.11□□□□□ -1.43
SMPD4P1-203ENST00000443839 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
SMPD4P1-203ENST00000443839 LCE6AA0A183 80 aa6.11□□□□□ -1.43
SMPD4P1-203ENST00000443839 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
SMPD4P1-203ENST00000443839 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
SMPD4P1-203ENST00000443839 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
SMPD4P1-203ENST00000443839 A0A096LNI7 61 aa6.1□□□□□ -1.43
SMPD4P1-203ENST00000443839 SMIM11BQ8TCY0 68 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms