RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PDZD2O15018 2839 aa2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 USP9YO00507 2555 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P11-201ENST00000440127 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 PTPN13Q12923 2485 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 CRPP02741 224 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 ANGP03950 147 aaKnown RBP2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 HTN3P15516 51 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 PFN2P35080 140 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 CXCL5P42830 114 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 CCL18P55774 89 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 CKS1BP61024 79 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 LELP1Q5T871 98 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 LINC00269Q8N2A0 174 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 UBE2WQ96B02 151 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 ZFYVE26Q68DK2 2539 aa2.27□□□□□ -2.05
HMGB3P11-201ENST00000440127 LRRK2Q5S007 2527 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 IGLV10-54A0A075B6I4 117 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 IGKV2-28A0A075B6P5 120 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 TRAV8-4A0A0B4J246 113 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 H0YGX0 51 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 H3BNG1 76 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 OXTP01178 125 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 IGKV2D-28P01615 120 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 TRACP01848 142 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 COX17Q14061 63 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 KIAA0087Q14695 138 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 DEFB121Q5J5C9 76 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 CLPSL2Q6UWE3 100 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 LYPD5Q6UWN5 251 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 LINC00337Q8N6G1 96 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 C3orf56Q8N813 242 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 C11orf68Q9H3H3 251 aaKnown RBP2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 KLK5Q9Y337 293 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 ITPR3Q14573 2671 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 APCP25054 2843 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 TEX15Q9BXT5 2789 aa2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 KMT2BQ9UMN6 2715 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P11-201ENST00000440127 SORL1Q92673 2214 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 TEX49A0A1B0GTD5 131 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 NDUFC2O95298 119 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 BAALC-AS2P0C853 105 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 OR13C6PQ8NH95 151 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 MUC7Q8TAX7 377 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 SMIM11BQ8TCY0 68 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 KLK12Q9UKR0 248 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 ABCA12Q86UK0 2595 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 CREBBPQ92793 2442 aa2.25□□□□□ -2.05
HMGB3P11-201ENST00000440127 KRTAP4-16G5E9R7 235 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 MT-ATP8P03928 68 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 ACYP1P07311 99 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 SPAG11BQ08648 103 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 ENHOQ6UWT2 76 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 LINC00336Q6ZUF6 198 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 TYMSOSQ8TAI1 123 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 C7orf33Q8WU49 177 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 CSMD1Q96PZ7 3565 aa2.24□□□□□ -2.05
HMGB3P11-201ENST00000440127 EPG5Q9HCE0 2579 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 FAM240AA0A1B0GVK7 77 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 A0A1B0GX51 115 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 LECT2O14960 151 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 RTL8CO15255 209 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 SNCGO76070 127 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 DNAL4O96015 105 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 INAFM2P0DMQ5 153 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 PRR3P79522 188 aaKnown RBP2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 ESRGQ1W209 222 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 C9orf116Q5BN46 136 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 CASC10Q5T4H9 136 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 UNQ6190/PRO20217Q6UXQ8 127 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 WFDC10BQ8IUB3 73 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 C15orf53Q8NAA6 179 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 TMEM126AQ9H061 195 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 ANAPC11Q9NYG5 84 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 CELSR1Q9NYQ6 3014 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 MXRA5Q9NR99 2828 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 TENM4Q6N022 2769 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 CELSR2Q9HCU4 2923 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 SVEP1Q4LDE5 3571 aa2.23□□□□□ -2.05
HMGB3P11-201ENST00000440127 FLNAP21333 2647 aaKnown RBP2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 ASH1LQ9NR48 2969 aaKnown RBP2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 ZANQ9Y493 2812 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 DEFB131BA0A096LNP1 70 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 GVQW2A0A096LPI5 108 aaPredicted RBP2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 CHTF8P0CG12 524 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 S100A7L2Q5SY68 101 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 Q6Q795 121 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 MRAPQ8TCY5 172 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 LINC00167Q96N53 147 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 C6orf48Q9UBA6 75 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 CENPEQ02224 2701 aa2.22□□□□□ -2.05
HMGB3P11-201ENST00000440127 VPS13CQ709C8 3753 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 A0A1B0GV72 72 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 NCR3O14931 201 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 TTC32Q5I0X7 151 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms