RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 C9orf163Q8N9P6 203 aa5.52□□□□□ -1.53
SCRN1-208ENST00000438497 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.51□□□□□ -1.53
SCRN1-208ENST00000438497 A0A0B4J2C4 111 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 PANO1I0J062 215 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 K7EMI3 77 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 CFC1P0CG37 223 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 HERVK_113P61574 105 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 V9GYY9 64 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 LPAP08519 4548 aa5.51□□□□□ -1.53
SCRN1-208ENST00000438497 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 ZNF815PA8K554 130 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 C2orf82Q6UX34 121 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 SDIM1Q6ZPB5 146 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 COX8CQ7Z4L0 72 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 PRNTQ86SH4 94 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 C2orf48Q96LS8 159 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 JPT2Q9H910 190 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
SCRN1-208ENST00000438497 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
SCRN1-208ENST00000438497 C4orf26Q17RF5 130 aa5.49□□□□□ -1.53
SCRN1-208ENST00000438497 Q5XG85 94 aa5.49□□□□□ -1.53
SCRN1-208ENST00000438497 HRCT1Q6UXD1 115 aa5.49□□□□□ -1.53
SCRN1-208ENST00000438497 PLEKHB2Q96CS7 222 aa5.49□□□□□ -1.53
SCRN1-208ENST00000438497 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 TRAV21A0A0B4J279 112 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 USP17L23D6RBM5 183 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 COX6CP09669 75 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 RNF185Q96GF1 192 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
SCRN1-208ENST00000438497 HIST1H4AP62805 103 aaKnown RBP5.47□□□□□ -1.53
SCRN1-208ENST00000438497 ORMDL2Q53FV1 153 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 GOLT1AQ6ZVE7 132 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 CNFNQ9BYD5 112 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 Q9UF83 564 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
SCRN1-208ENST00000438497 A0A087WYN8 130 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 TEX49A0A1B0GTD5 131 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 NDUFC2O95298 119 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 ENHOQ6UWT2 76 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 C7orf33Q8WU49 177 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 CHCHD7Q9BUK0 85 aa5.46□□□□□ -1.54
SCRN1-208ENST00000438497 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 hADV29S1A0JD25 119 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 SMKR1H3BMG3 65 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
SCRN1-208ENST00000438497 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 REG3GQ6UW15 175 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 NEXN-AS1Q8NBZ9 246 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 TOMM6Q96B49 74 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 SCGB3A1Q96QR1 104 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 KIF25-AS1Q9Y6Z4 181 aa5.45□□□□□ -1.54
SCRN1-208ENST00000438497 MUC2Q02817 5179 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 H7C423 109 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 CRPP02741 224 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 PFN2P35080 140 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 CRIP1P50238 77 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 C9orf85Q96MD7 179 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
SCRN1-208ENST00000438497 J3QQQ9 107 aa5.43□□□□□ -1.54
SCRN1-208ENST00000438497 SH2D1AO60880 128 aa5.43□□□□□ -1.54
SCRN1-208ENST00000438497 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
SCRN1-208ENST00000438497 RPL18AQ02543 176 aaKnown RBP5.43□□□□□ -1.54
SCRN1-208ENST00000438497 C14orf178Q8N769 122 aaPredicted RBP5.43□□□□□ -1.54
SCRN1-208ENST00000438497 DAND5Q8N907 189 aa5.43□□□□□ -1.54
SCRN1-208ENST00000438497 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
SCRN1-208ENST00000438497 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 CHTF8P0CG12 524 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 Q1RN00 199 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 C11orf21Q9P2W6 132 aa5.42□□□□□ -1.54
SCRN1-208ENST00000438497 LST1O00453 97 aa5.41□□□□□ -1.54
SCRN1-208ENST00000438497 PPP1R17O96001 155 aa5.41□□□□□ -1.54
SCRN1-208ENST00000438497 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
SCRN1-208ENST00000438497 RNASE3P12724 160 aaKnown RBP5.41□□□□□ -1.54
SCRN1-208ENST00000438497 NPC2P61916 151 aa5.41□□□□□ -1.54
SCRN1-208ENST00000438497 MIAQ16674 131 aa5.41□□□□□ -1.54
SCRN1-208ENST00000438497 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
SCRN1-208ENST00000438497 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 TMEM223A0PJW6 202 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 SDHAF1A6NFY7 115 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 LEPROTO15243 131 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 LGALS3P17931 250 aaKnown RBP5.4□□□□□ -1.54
SCRN1-208ENST00000438497 ZNF80P51504 273 aaPredicted RBP5.4□□□□□ -1.54
SCRN1-208ENST00000438497 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
SCRN1-208ENST00000438497 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SCRN1-208ENST00000438497 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 LCE2AQ5TA79 106 aaPredicted RBP5.4□□□□□ -1.54
SCRN1-208ENST00000438497 NRACQ8N912 160 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 TMEM141Q96I45 108 aa5.4□□□□□ -1.54
SCRN1-208ENST00000438497 SMIM2Q9BVW6 85 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms