RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
TNFRSF1A-203ENST00000437813 CTAG1AP78358 180 aa8.32□□□□□ -1.08
TNFRSF1A-203ENST00000437813 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
TNFRSF1A-203ENST00000437813 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
TNFRSF1A-203ENST00000437813 RPS10P5Q9NQ39 176 aa8.32□□□□□ -1.08
TNFRSF1A-203ENST00000437813 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
TNFRSF1A-203ENST00000437813 NDUFA6P56556 154 aa8.3□□□□□ -1.08
TNFRSF1A-203ENST00000437813 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
TNFRSF1A-203ENST00000437813 C3orf22Q8N5N4 141 aa8.28□□□□□ -1.08
TNFRSF1A-203ENST00000437813 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
TNFRSF1A-203ENST00000437813 GHRHP01286 108 aa8.27□□□□□ -1.09
TNFRSF1A-203ENST00000437813 TMEM170BQ5T4T1 132 aa8.27□□□□□ -1.09
TNFRSF1A-203ENST00000437813 IGKV2D-26A0A0A0MRZ7 120 aa8.26□□□□□ -1.09
TNFRSF1A-203ENST00000437813 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
TNFRSF1A-203ENST00000437813 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
TNFRSF1A-203ENST00000437813 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
TNFRSF1A-203ENST00000437813 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF1A-203ENST00000437813 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
TNFRSF1A-203ENST00000437813 SPRR1AP35321 89 aa8.24□□□□□ -1.09
TNFRSF1A-203ENST00000437813 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
TNFRSF1A-203ENST00000437813 CHTOPQ9Y3Y2 248 aaKnown RBP8.24□□□□□ -1.09
TNFRSF1A-203ENST00000437813 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
TNFRSF1A-203ENST00000437813 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
TNFRSF1A-203ENST00000437813 LINC00158P58513 81 aa8.22□□□□□ -1.09
TNFRSF1A-203ENST00000437813 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
TNFRSF1A-203ENST00000437813 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.1
TNFRSF1A-203ENST00000437813 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
TNFRSF1A-203ENST00000437813 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
TNFRSF1A-203ENST00000437813 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
TNFRSF1A-203ENST00000437813 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
TNFRSF1A-203ENST00000437813 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
TNFRSF1A-203ENST00000437813 APOC3P02656 99 aa8.2□□□□□ -1.1
TNFRSF1A-203ENST00000437813 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
TNFRSF1A-203ENST00000437813 PRYO14603 147 aa8.19□□□□□ -1.1
TNFRSF1A-203ENST00000437813 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
TNFRSF1A-203ENST00000437813 SNAPINO95295 136 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 SPAG11AQ6PDA7 123 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 SVBPQ8N300 66 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 PPDPFQ9H3Y8 114 aa8.18□□□□□ -1.1
TNFRSF1A-203ENST00000437813 LOC107984156A0A0G2JMH3 177 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 LINC00310P59036 64 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 LINC00483Q53H64 154 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 ARL17AQ8IVW1 177 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
TNFRSF1A-203ENST00000437813 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
TNFRSF1A-203ENST00000437813 HERV-K104P63124 156 aa8.16□□□□□ -1.1
TNFRSF1A-203ENST00000437813 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 NCR3O14931 201 aa8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 FAM19A2Q8N3H0 131 aa8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF1A-203ENST00000437813 Q8NBF4 154 aa8.14□□□□□ -1.11
TNFRSF1A-203ENST00000437813 DAND5Q8N907 189 aa8.13□□□□□ -1.11
TNFRSF1A-203ENST00000437813 B5MCH6 92 aa8.12□□□□□ -1.11
TNFRSF1A-203ENST00000437813 ERC2-IT1O76042 136 aa8.12□□□□□ -1.11
TNFRSF1A-203ENST00000437813 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
TNFRSF1A-203ENST00000437813 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
TNFRSF1A-203ENST00000437813 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
TNFRSF1A-203ENST00000437813 Q9BRP9 147 aa8.11□□□□□ -1.11
TNFRSF1A-203ENST00000437813 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
TNFRSF1A-203ENST00000437813 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
TNFRSF1A-203ENST00000437813 HSBP1O75506 76 aa8.1□□□□□ -1.11
TNFRSF1A-203ENST00000437813 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 LEPROTO15243 131 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 SPINK1P00995 79 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
TNFRSF1A-203ENST00000437813 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
TNFRSF1A-203ENST00000437813 Q6ZRX8 168 aa8.08□□□□□ -1.12
TNFRSF1A-203ENST00000437813 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
TNFRSF1A-203ENST00000437813 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
TNFRSF1A-203ENST00000437813 SERF1AO75920 110 aa8.07□□□□□ -1.12
TNFRSF1A-203ENST00000437813 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
TNFRSF1A-203ENST00000437813 TRGC2P03986 189 aa8.07□□□□□ -1.12
TNFRSF1A-203ENST00000437813 Q8N377 158 aa8.07□□□□□ -1.12
TNFRSF1A-203ENST00000437813 J3QQQ9 107 aa8.06□□□□□ -1.12
TNFRSF1A-203ENST00000437813 LEPROTL1O95214 131 aa8.06□□□□□ -1.12
TNFRSF1A-203ENST00000437813 PLNP26678 52 aa8.06□□□□□ -1.12
TNFRSF1A-203ENST00000437813 DDTP30046 118 aa8.06□□□□□ -1.12
TNFRSF1A-203ENST00000437813 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
TNFRSF1A-203ENST00000437813 NDUFC2O95298 119 aa8.05□□□□□ -1.12
TNFRSF1A-203ENST00000437813 SOSTDC1Q6X4U4 206 aa8.05□□□□□ -1.12
TNFRSF1A-203ENST00000437813 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
TNFRSF1A-203ENST00000437813 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
TNFRSF1A-203ENST00000437813 H0Y8G0 127 aa8.04□□□□□ -1.12
TNFRSF1A-203ENST00000437813 MOBPQ13875 183 aa8.04□□□□□ -1.12
TNFRSF1A-203ENST00000437813 NMUP48645 174 aa8.03□□□□□ -1.12
TNFRSF1A-203ENST00000437813 DPM2O94777 84 aa8.02□□□□□ -1.13
TNFRSF1A-203ENST00000437813 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms