RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 A0A0U1RQV1 116 aa11.67□□□□□ -0.54
COL6A2-206ENST00000436769 COMMD7Q86VX2 200 aa11.67□□□□□ -0.54
COL6A2-206ENST00000436769 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
COL6A2-206ENST00000436769 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
COL6A2-206ENST00000436769 CTAG1AP78358 180 aa11.65□□□□□ -0.54
COL6A2-206ENST00000436769 TPRXLQ17RH7 258 aa11.63□□□□□ -0.55
COL6A2-206ENST00000436769 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
COL6A2-206ENST00000436769 LCE2AQ5TA79 106 aaPredicted RBP11.63□□□□□ -0.55
COL6A2-206ENST00000436769 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
COL6A2-206ENST00000436769 CBLN2Q8IUK8 224 aa11.63□□□□□ -0.55
COL6A2-206ENST00000436769 C3orf22Q8N5N4 141 aa11.63□□□□□ -0.55
COL6A2-206ENST00000436769 IGLV7-46A0A075B6I9 117 aa11.6□□□□□ -0.55
COL6A2-206ENST00000436769 LINC00158P58513 81 aa11.59□□□□□ -0.55
COL6A2-206ENST00000436769 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
COL6A2-206ENST00000436769 CHTOPQ9Y3Y2 248 aaKnown RBP11.59□□□□□ -0.55
COL6A2-206ENST00000436769 TMEM223A0PJW6 202 aa11.58□□□□□ -0.56
COL6A2-206ENST00000436769 CDIP1Q9H305 208 aa11.58□□□□□ -0.56
COL6A2-206ENST00000436769 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
COL6A2-206ENST00000436769 SPRR4Q96PI1 79 aa11.57□□□□□ -0.56
COL6A2-206ENST00000436769 KRTAP9-2Q9BYQ4 174 aa11.55□□□□□ -0.56
COL6A2-206ENST00000436769 TRAV12-1A0A0B4J245 112 aa11.54□□□□□ -0.56
COL6A2-206ENST00000436769 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
COL6A2-206ENST00000436769 SPAG11AQ6PDA7 123 aa11.53□□□□□ -0.56
COL6A2-206ENST00000436769 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
COL6A2-206ENST00000436769 SPRR1AP35321 89 aa11.52□□□□□ -0.57
COL6A2-206ENST00000436769 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
COL6A2-206ENST00000436769 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
COL6A2-206ENST00000436769 PRYO14603 147 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 APOC3P02656 99 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 BOD1L2Q8IYS8 172 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 CHCHD1Q96BP2 118 aaKnown RBP11.5□□□□□ -0.57
COL6A2-206ENST00000436769 YPEL4Q96NS1 127 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 KCNQ1DNQ9H478 68 aa11.5□□□□□ -0.57
COL6A2-206ENST00000436769 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
COL6A2-206ENST00000436769 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-206ENST00000436769 DAND5Q8N907 189 aa11.47□□□□□ -0.57
COL6A2-206ENST00000436769 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
COL6A2-206ENST00000436769 NCR3O14931 201 aa11.46□□□□□ -0.57
COL6A2-206ENST00000436769 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
COL6A2-206ENST00000436769 SNAPINO95295 136 aa11.46□□□□□ -0.57
COL6A2-206ENST00000436769 HERV-K104P63124 156 aa11.46□□□□□ -0.57
COL6A2-206ENST00000436769 MEIG1Q5JSS6 88 aa11.46□□□□□ -0.57
COL6A2-206ENST00000436769 FP248Q71RG6 208 aaPredicted RBP11.46□□□□□ -0.57
COL6A2-206ENST00000436769 SVBPQ8N300 66 aa11.45□□□□□ -0.58
COL6A2-206ENST00000436769 Q8NBF4 154 aa11.45□□□□□ -0.58
COL6A2-206ENST00000436769 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
COL6A2-206ENST00000436769 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
COL6A2-206ENST00000436769 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
COL6A2-206ENST00000436769 LINC00483Q53H64 154 aa11.43□□□□□ -0.58
COL6A2-206ENST00000436769 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
COL6A2-206ENST00000436769 KRTAP13-3Q3SY46 172 aa11.42□□□□□ -0.58
COL6A2-206ENST00000436769 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
COL6A2-206ENST00000436769 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
COL6A2-206ENST00000436769 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
COL6A2-206ENST00000436769 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
COL6A2-206ENST00000436769 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
COL6A2-206ENST00000436769 MYMXA0A1B0GTQ4 84 aa11.4□□□□□ -0.58
COL6A2-206ENST00000436769 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
COL6A2-206ENST00000436769 B5MCH6 92 aa11.39□□□□□ -0.59
COL6A2-206ENST00000436769 SPINK1P00995 79 aa11.39□□□□□ -0.59
COL6A2-206ENST00000436769 HSBP1O75506 76 aa11.38□□□□□ -0.59
COL6A2-206ENST00000436769 ERC2-IT1O76042 136 aa11.38□□□□□ -0.59
COL6A2-206ENST00000436769 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
COL6A2-206ENST00000436769 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
COL6A2-206ENST00000436769 LEPROTO15243 131 aa11.35□□□□□ -0.59
COL6A2-206ENST00000436769 Q9BRP9 147 aa11.35□□□□□ -0.59
COL6A2-206ENST00000436769 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
COL6A2-206ENST00000436769 H0Y8G0 127 aa11.34□□□□□ -0.59
COL6A2-206ENST00000436769 DDTP30046 118 aa11.34□□□□□ -0.59
COL6A2-206ENST00000436769 LINC00310P59036 64 aa11.34□□□□□ -0.59
COL6A2-206ENST00000436769 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
COL6A2-206ENST00000436769 S100A12P80511 92 aa11.32□□□□□ -0.6
COL6A2-206ENST00000436769 MOBPQ13875 183 aa11.32□□□□□ -0.6
COL6A2-206ENST00000436769 SSBP3-AS1Q7Z2R9 100 aa11.32□□□□□ -0.6
COL6A2-206ENST00000436769 KRTAP4-1Q9BYQ7 146 aa11.32□□□□□ -0.6
COL6A2-206ENST00000436769 IGLV9-49A0A0B4J1Y8 123 aa11.31□□□□□ -0.6
COL6A2-206ENST00000436769 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
COL6A2-206ENST00000436769 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
COL6A2-206ENST00000436769 Q6ZRX8 168 aa11.31□□□□□ -0.6
COL6A2-206ENST00000436769 Q8N377 158 aa11.31□□□□□ -0.6
COL6A2-206ENST00000436769 J3QQQ9 107 aa11.3□□□□□ -0.6
COL6A2-206ENST00000436769 TRGC2P03986 189 aa11.3□□□□□ -0.6
COL6A2-206ENST00000436769 SERF1AO75920 110 aa11.29□□□□□ -0.6
COL6A2-206ENST00000436769 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
COL6A2-206ENST00000436769 PLNP26678 52 aa11.29□□□□□ -0.6
COL6A2-206ENST00000436769 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
COL6A2-206ENST00000436769 NDUFC2O95298 119 aa11.28□□□□□ -0.6
COL6A2-206ENST00000436769 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-206ENST00000436769 DPM2O94777 84 aa11.26□□□□□ -0.61
COL6A2-206ENST00000436769 NMUP48645 174 aa11.26□□□□□ -0.61
COL6A2-206ENST00000436769 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
COL6A2-206ENST00000436769 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
COL6A2-206ENST00000436769 SLC7A5P1Q8MH63 180 aa11.25□□□□□ -0.61
COL6A2-206ENST00000436769 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
COL6A2-206ENST00000436769 KRTAP9-6A0A140TA67 174 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 SLC25A20O43772 301 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 IGKCP01834 107 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 FABP4P15090 132 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms