RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
SPTLC1P4-201ENST00000435997 A0A096LNJ9 63 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 PFN2P35080 140 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 COX17Q14061 63 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 FAM19A1Q7Z5A9 133 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 C3orf22Q8N5N4 141 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
SPTLC1P4-201ENST00000435997 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
SPTLC1P4-201ENST00000435997 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
SPTLC1P4-201ENST00000435997 ZNF625Q96I27 306 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1P4-201ENST00000435997 RAB14P61106 215 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 CLLU1Q5K131 121 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 SPAG11AQ6PDA7 123 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 SFTA2Q6UW10 78 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 FA2HQ7L5A8 372 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SPTLC1P4-201ENST00000435997 TMEM218A2RU14 115 aa6.22□□□□□ -1.41
SPTLC1P4-201ENST00000435997 UQCC3Q6UW78 93 aa6.22□□□□□ -1.41
SPTLC1P4-201ENST00000435997 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
SPTLC1P4-201ENST00000435997 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
SPTLC1P4-201ENST00000435997 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
SPTLC1P4-201ENST00000435997 COX19Q49B96 90 aa6.21□□□□□ -1.42
SPTLC1P4-201ENST00000435997 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
SPTLC1P4-201ENST00000435997 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
SPTLC1P4-201ENST00000435997 SMCO4Q9NRQ5 59 aa6.21□□□□□ -1.42
SPTLC1P4-201ENST00000435997 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
SPTLC1P4-201ENST00000435997 S100PP25815 95 aa6.2□□□□□ -1.42
SPTLC1P4-201ENST00000435997 SPRR1AP35321 89 aa6.19□□□□□ -1.42
SPTLC1P4-201ENST00000435997 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
SPTLC1P4-201ENST00000435997 SEC11CQ9BY50 192 aa6.19□□□□□ -1.42
SPTLC1P4-201ENST00000435997 KRTAP4-16G5E9R7 235 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1P4-201ENST00000435997 HBDP02042 147 aa6.18□□□□□ -1.42
SPTLC1P4-201ENST00000435997 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
SPTLC1P4-201ENST00000435997 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1P4-201ENST00000435997 PRYO14603 147 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 NDUFA6P56556 154 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 FABP9Q0Z7S8 132 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 Q8NBF4 154 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
SPTLC1P4-201ENST00000435997 LINC00614P0C842 121 aa6.16□□□□□ -1.42
SPTLC1P4-201ENST00000435997 PMCHL1Q16048 86 aa6.16□□□□□ -1.42
SPTLC1P4-201ENST00000435997 TMEM170BQ5T4T1 132 aa6.16□□□□□ -1.42
SPTLC1P4-201ENST00000435997 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
SPTLC1P4-201ENST00000435997 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 SPINK1P00995 79 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 C10orf91Q5T1B1 145 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 BAGE3Q86Y29 109 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 DAND5Q8N907 189 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 SMCR5Q8TEV8 140 aa6.15□□□□□ -1.42
SPTLC1P4-201ENST00000435997 LINC00158P58513 81 aa6.14□□□□□ -1.43
SPTLC1P4-201ENST00000435997 RHEBQ15382 184 aa6.14□□□□□ -1.43
SPTLC1P4-201ENST00000435997 IFITM2Q01629 132 aa6.13□□□□□ -1.43
SPTLC1P4-201ENST00000435997 TRAV12-1A0A0B4J245 112 aa6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 A0A0U1RRA0 63 aa6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 SMIM13P0DJ93 91 aa6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 BOD1L2Q8IYS8 172 aa6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 Q8N377 158 aa6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 CHTOPQ9Y3Y2 248 aaKnown RBP6.12□□□□□ -1.43
SPTLC1P4-201ENST00000435997 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
SPTLC1P4-201ENST00000435997 NCR3O14931 201 aa6.11□□□□□ -1.43
SPTLC1P4-201ENST00000435997 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
SPTLC1P4-201ENST00000435997 RPS10P5Q9NQ39 176 aa6.11□□□□□ -1.43
SPTLC1P4-201ENST00000435997 TRAPPC1Q9Y5R8 145 aa6.11□□□□□ -1.43
SPTLC1P4-201ENST00000435997 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
SPTLC1P4-201ENST00000435997 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
SPTLC1P4-201ENST00000435997 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 B5MCH6 92 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 HERV-K104P63124 156 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 MOBPQ13875 183 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 COMMD7Q86VX2 200 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
SPTLC1P4-201ENST00000435997 ETDCA0A1B0GVM5 59 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 ERC2-IT1O76042 136 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 Q9BRP9 147 aa6.08□□□□□ -1.44
SPTLC1P4-201ENST00000435997 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
SPTLC1P4-201ENST00000435997 Q6ZRX8 168 aa6.07□□□□□ -1.44
SPTLC1P4-201ENST00000435997 SSBP3-AS1Q7Z2R9 100 aa6.07□□□□□ -1.44
SPTLC1P4-201ENST00000435997 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
SPTLC1P4-201ENST00000435997 NDUFA12Q9UI09 145 aa6.07□□□□□ -1.44
SPTLC1P4-201ENST00000435997 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
SPTLC1P4-201ENST00000435997 LINC00587B1AMM8 73 aa6.06□□□□□ -1.44
SPTLC1P4-201ENST00000435997 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
SPTLC1P4-201ENST00000435997 IGLV9-49A0A0B4J1Y8 123 aa6.05□□□□□ -1.44
SPTLC1P4-201ENST00000435997 SLC25A20O43772 301 aa6.05□□□□□ -1.44
SPTLC1P4-201ENST00000435997 ATP6V1G1O75348 118 aa6.05□□□□□ -1.44
SPTLC1P4-201ENST00000435997 YPEL4Q96NS1 127 aa6.05□□□□□ -1.44
SPTLC1P4-201ENST00000435997 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
SPTLC1P4-201ENST00000435997 IGLV6-57P01721 117 aa6.04□□□□□ -1.44
SPTLC1P4-201ENST00000435997 DDTP30046 118 aa6.04□□□□□ -1.44
SPTLC1P4-201ENST00000435997 MAP1LC3CQ9BXW4 147 aa6.04□□□□□ -1.44
SPTLC1P4-201ENST00000435997 S100A12P80511 92 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms