RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
CPNE1-214ENST00000435747 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
CPNE1-214ENST00000435747 PFN2P35080 140 aa6.02□□□□□ -1.45
CPNE1-214ENST00000435747 COX17Q14061 63 aa6.02□□□□□ -1.45
CPNE1-214ENST00000435747 BAGE3Q86Y29 109 aa6.02□□□□□ -1.45
CPNE1-214ENST00000435747 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
CPNE1-214ENST00000435747 NDUFA6P56556 154 aa6.01□□□□□ -1.45
CPNE1-214ENST00000435747 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
CPNE1-214ENST00000435747 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
CPNE1-214ENST00000435747 TMEM223A0PJW6 202 aa6□□□□□ -1.45
CPNE1-214ENST00000435747 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
CPNE1-214ENST00000435747 NKAPP1Q8N9T2 125 aa6□□□□□ -1.45
CPNE1-214ENST00000435747 CHCHD1Q96BP2 118 aaKnown RBP6□□□□□ -1.45
CPNE1-214ENST00000435747 USH2AO75445 5202 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 M0R378 163 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
CPNE1-214ENST00000435747 LINC00310P59036 64 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 NDUFA5Q16718 116 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 TMEM170BQ5T4T1 132 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 ANAPC11Q9NYG5 84 aa5.99□□□□□ -1.45
CPNE1-214ENST00000435747 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
CPNE1-214ENST00000435747 TMEM238C9JI98 176 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 MT1HP80294 61 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 FAM229BQ4G0N7 80 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 IFI27L1Q96BM0 104 aa5.98□□□□□ -1.45
CPNE1-214ENST00000435747 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
CPNE1-214ENST00000435747 PRLHP81277 87 aa5.97□□□□□ -1.45
CPNE1-214ENST00000435747 CBLN2Q8IUK8 224 aa5.97□□□□□ -1.45
CPNE1-214ENST00000435747 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
CPNE1-214ENST00000435747 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
CPNE1-214ENST00000435747 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
CPNE1-214ENST00000435747 UBE2AP49459 152 aa5.96□□□□□ -1.46
CPNE1-214ENST00000435747 RPL24P83731 157 aaKnown RBP5.96□□□□□ -1.46
CPNE1-214ENST00000435747 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
CPNE1-214ENST00000435747 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
CPNE1-214ENST00000435747 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
CPNE1-214ENST00000435747 PLEKHB2Q96CS7 222 aa5.95□□□□□ -1.46
CPNE1-214ENST00000435747 TRGC2P03986 189 aa5.94□□□□□ -1.46
CPNE1-214ENST00000435747 FAM19A1Q7Z5A9 133 aa5.94□□□□□ -1.46
CPNE1-214ENST00000435747 KRTAP4-16G5E9R7 235 aaPredicted RBP5.93□□□□□ -1.46
CPNE1-214ENST00000435747 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
CPNE1-214ENST00000435747 SPRR1AP35321 89 aa5.93□□□□□ -1.46
CPNE1-214ENST00000435747 LINC00158P58513 81 aa5.93□□□□□ -1.46
CPNE1-214ENST00000435747 TSPEAR-AS2P59090 65 aa5.93□□□□□ -1.46
CPNE1-214ENST00000435747 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
CPNE1-214ENST00000435747 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
CPNE1-214ENST00000435747 HSBP1O75506 76 aa5.92□□□□□ -1.46
CPNE1-214ENST00000435747 SERF1AO75920 110 aa5.92□□□□□ -1.46
CPNE1-214ENST00000435747 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
CPNE1-214ENST00000435747 HERV-K104P63124 156 aa5.91□□□□□ -1.46
CPNE1-214ENST00000435747 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
CPNE1-214ENST00000435747 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
CPNE1-214ENST00000435747 KCNQ1DNQ9H478 68 aa5.91□□□□□ -1.46
CPNE1-214ENST00000435747 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 COLCA2A8K830 154 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 CTAG1AP78358 180 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 SPRR4Q96PI1 79 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 NDUFA12Q9UI09 145 aa5.9□□□□□ -1.46
CPNE1-214ENST00000435747 PRYO14603 147 aa5.89□□□□□ -1.47
CPNE1-214ENST00000435747 LEPROTL1O95214 131 aa5.89□□□□□ -1.47
CPNE1-214ENST00000435747 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
CPNE1-214ENST00000435747 SLC7A5P1Q8MH63 180 aa5.89□□□□□ -1.47
CPNE1-214ENST00000435747 LEPROTO15243 131 aa5.88□□□□□ -1.47
CPNE1-214ENST00000435747 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
CPNE1-214ENST00000435747 MEIG1Q5JSS6 88 aa5.88□□□□□ -1.47
CPNE1-214ENST00000435747 HIGD2AQ9BW72 106 aa5.88□□□□□ -1.47
CPNE1-214ENST00000435747 TRBV10-3A0A0K0K1G6 114 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 MYMXA0A1B0GTQ4 84 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 M0R2T5 61 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 NCR3O14931 201 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 PLNP26678 52 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
CPNE1-214ENST00000435747 LINC00587B1AMM8 73 aa5.86□□□□□ -1.47
CPNE1-214ENST00000435747 H0Y8G0 127 aa5.86□□□□□ -1.47
CPNE1-214ENST00000435747 J3QQQ9 107 aa5.86□□□□□ -1.47
CPNE1-214ENST00000435747 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
CPNE1-214ENST00000435747 DAND5Q8N907 189 aa5.86□□□□□ -1.47
CPNE1-214ENST00000435747 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
CPNE1-214ENST00000435747 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
CPNE1-214ENST00000435747 EIF4EBP3O60516 100 aaPredicted RBP5.85□□□□□ -1.47
CPNE1-214ENST00000435747 DPM2O94777 84 aa5.85□□□□□ -1.47
CPNE1-214ENST00000435747 LINC00483Q53H64 154 aa5.85□□□□□ -1.47
CPNE1-214ENST00000435747 PMCHL2Q9BQD1 86 aa5.85□□□□□ -1.47
CPNE1-214ENST00000435747 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
CPNE1-214ENST00000435747 B5MCH6 92 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 IGKCP01834 107 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 FABP4P15090 132 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 NMUP48645 174 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
CPNE1-214ENST00000435747 MAP1LC3CQ9BXW4 147 aa5.84□□□□□ -1.47
CPNE1-214ENST00000435747 ATP6V1G1O75348 118 aa5.83□□□□□ -1.48
CPNE1-214ENST00000435747 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms