RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 TIMM17AQ99595 171 aa3.34□□□□□ -1.87
HDAC9-213ENST00000433709 GEMIN7Q9H840 131 aaKnown RBP3.34□□□□□ -1.87
HDAC9-213ENST00000433709 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 A0A1B0GVG6 124 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 NDUFC2-KCTD14E9PQ53 114 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
HDAC9-213ENST00000433709 SFTA2Q6UW10 78 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 Q8IZM0 81 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
HDAC9-213ENST00000433709 FLG2Q5D862 2391 aaPredicted RBP3.32□□□□□ -1.88
HDAC9-213ENST00000433709 H3BRM9 83 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
HDAC9-213ENST00000433709 UBE2D1P51668 147 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
HDAC9-213ENST00000433709 UBE2BP63146 152 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 C1orf137Q5JT78 98 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 AMELXQ99217 191 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 SEC11CQ9BY50 192 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 SMCO4Q9NRQ5 59 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 PSORS1C2Q9UIG4 136 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
HDAC9-213ENST00000433709 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 A0A1W2PNN7 141 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 TMEM218A2RU14 115 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 F8VRH5 84 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 NUPR1O60356 82 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 SNAPINO95295 136 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 IGLV7-43P04211 117 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 RAB5BP61020 215 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 RHEBQ15382 184 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 NDUFA5Q16718 116 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 PDZD11Q5EBL8 140 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 MTURNQ8N3F0 131 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 TOMM6Q96B49 74 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 TOMM7Q9P0U1 55 aa3.31□□□□□ -1.88
HDAC9-213ENST00000433709 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
HDAC9-213ENST00000433709 RYR1P21817 5038 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 TINCRA0A1B0GVN0 87 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 M0QXV9 152 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 PMVKQ15126 192 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 FA2HQ7L5A8 372 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 C6orf48Q9UBA6 75 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 TP73-AS1Q9UF72 201 aa3.3□□□□□ -1.88
HDAC9-213ENST00000433709 CARHSP1Q9Y2V2 147 aaKnown RBP3.3□□□□□ -1.88
HDAC9-213ENST00000433709 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
HDAC9-213ENST00000433709 ATP5LO75964 103 aa3.29□□□□□ -1.88
HDAC9-213ENST00000433709 RPL28P46779 137 aaKnown RBP3.29□□□□□ -1.88
HDAC9-213ENST00000433709 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
HDAC9-213ENST00000433709 FAM19A5Q7Z5A7 132 aaPredicted RBP3.29□□□□□ -1.88
HDAC9-213ENST00000433709 LINC00469Q8N7U9 141 aa3.29□□□□□ -1.88
HDAC9-213ENST00000433709 LINC00587B1AMM8 73 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 CTAG1AP78358 180 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 FABP9Q0Z7S8 132 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 COX17Q14061 63 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
HDAC9-213ENST00000433709 LINC00614P0C842 121 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
HDAC9-213ENST00000433709 SVBPQ8N300 66 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 NKAPP1Q8N9T2 125 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 CST9LQ9H4G1 147 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 HSPG2P98160 4391 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 DNAH5Q8TE73 4624 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 LRP1BQ9NZR2 4599 aa3.27□□□□□ -1.89
HDAC9-213ENST00000433709 DYNC1H1Q14204 4646 aaKnown RBP3.26□□□□□ -1.89
HDAC9-213ENST00000433709 HBDP02042 147 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 S100A12P80511 92 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 C10orf91Q5T1B1 145 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 COMMD7Q86VX2 200 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 C22orf24Q9Y442 160 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
HDAC9-213ENST00000433709 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
HDAC9-213ENST00000433709 BCE1O60756 84 aa3.25□□□□□ -1.89
HDAC9-213ENST00000433709 NDUFA6P56556 154 aa3.25□□□□□ -1.89
HDAC9-213ENST00000433709 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
HDAC9-213ENST00000433709 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
HDAC9-213ENST00000433709 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
HDAC9-213ENST00000433709 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 CRYGAP11844 174 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 ADCYAP1P18509 176 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 UBE2AP49459 152 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
HDAC9-213ENST00000433709 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
HDAC9-213ENST00000433709 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 XAGE1AQ9HD64 81 aa3.24□□□□□ -1.89
HDAC9-213ENST00000433709 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
HDAC9-213ENST00000433709 APOC3P02656 99 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 IFITM2Q01629 132 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms