RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 C19orf73Q9NVV2 129 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 CDSNQ15517 529 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 Q6ZQY7 126 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 C6orf99Q4VX62 202 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 Q8NBF4 154 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 HIST1H4AP62805 103 aaKnown RBP2.6□□□□□ -1.99
SHPRH-205ENST00000433355 ADAMTSL4-AS1Q5T5F5 129 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 CFAP54Q96N23 3096 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 M0R2N4 97 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 LYPD5Q6UWN5 251 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 SPTSSBQ8NFR3 76 aa2.6□□□□□ -1.99
SHPRH-205ENST00000433355 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 PKD1L1Q8TDX9 2849 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 SMIM26A0A096LP01 95 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 C16orf90A8MZG2 172 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 HAMPP81172 84 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 CRYBG3Q68DQ2 2970 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
SHPRH-205ENST00000433355 IGKV3OR2-268A0A0C4DH90 116 aa2.59□□□□□ -2
SHPRH-205ENST00000433355 MT-ATP8P03928 68 aa2.59□□□□□ -2
SHPRH-205ENST00000433355 TNRC18O15417 2968 aaPredicted RBP2.59□□□□□ -2
SHPRH-205ENST00000433355 SMIM11BQ8TCY0 68 aa2.59□□□□□ -2
SHPRH-205ENST00000433355 LIMD2Q9BT23 127 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 PRB3Q04118 309 aaPredicted RBP2.58□□□□□ -2
SHPRH-205ENST00000433355 REG3GQ6UW15 175 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 LINC00528Q8N1L1 170 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 FRYQ5TBA9 3013 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 CELA1Q9UNI1 258 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 PLAC8L1A1L4L8 177 aa2.58□□□□□ -2
SHPRH-205ENST00000433355 Q6ZS46 218 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 C10orf25Q5T742 122 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 HTN3P15516 51 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 C1orf137Q5JT78 98 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 UBE2AP49459 152 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 BBC3Q96PG8 261 aaPredicted RBP2.57□□□□□ -2
SHPRH-205ENST00000433355 A0A096LPF7 62 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 GIG44P09565 113 aaPredicted RBP2.57□□□□□ -2
SHPRH-205ENST00000433355 Q6ZQT0 140 aa2.57□□□□□ -2
SHPRH-205ENST00000433355 ESM1Q9NQ30 184 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 ZNF575Q86XF7 245 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 FBN2P35556 2912 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 GAS8-AS1O95177 125 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 SPRR1BP22528 89 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 KRTAP1-1Q07627 177 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 MEGF8Q7Z7M0 2845 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 SPRR4Q96PI1 79 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 KIAA0087Q14695 138 aa2.56□□□□□ -2
SHPRH-205ENST00000433355 KRTAP21-3Q3LHN1 58 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 A0A087X002 238 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 Q6ZQT7 251 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 KRTAP1-3Q8IUG1 177 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 TM2D3Q9BRN9 247 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 CEP350Q5VT06 3117 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.55□□□□□ -2
SHPRH-205ENST00000433355 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 Q8N3U1 123 aa2.55□□□□□ -2
SHPRH-205ENST00000433355 C8orf87E5RJ46 101 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 FAM229AH3BQW9 127 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 IGKV2D-28P01615 120 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 CEMP1Q6PRD7 247 aaPredicted RBP2.54□□□□□ -2
SHPRH-205ENST00000433355 SMCPP49901 116 aaPredicted RBP2.54□□□□□ -2
SHPRH-205ENST00000433355 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
SHPRH-205ENST00000433355 A0A0U1RQV1 116 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 A0A0U1RRA0 63 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 SPRR1AP35321 89 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 PRO0628Q9UI54 55 aa2.54□□□□□ -2
SHPRH-205ENST00000433355 C4orf48Q5BLP8 95 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 UNQ6190/PRO20217Q6UXQ8 127 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 C3orf84H3BNL1 204 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 C10orf99Q6UWK7 81 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 A8MUN3 132 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 C6orf48Q9UBA6 75 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
SHPRH-205ENST00000433355 Q6ZVQ6 151 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 NOTCH2NLQ7Z3S9 236 aa2.53□□□□□ -2
SHPRH-205ENST00000433355 ESRGQ1W209 222 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 ENHOQ6UWT2 76 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 SSBP3-AS1Q7Z2R9 100 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 INAFM1C9JVW0 142 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 Q5XG85 94 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 TRAV22A0A0B4J277 110 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 NRGNQ92686 78 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 PRUNE2Q8WUY3 3088 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 MAPK1IP1LQ8NDC0 245 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
SHPRH-205ENST00000433355 ATMQ13315 3056 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 A8MWP4 228 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 C9orf163Q8N9P6 203 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 A0A087WYN8 130 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 SOSTDC1Q6X4U4 206 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms