RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 NBDYA0A0U1RRE5 68 aa9.2□□□□□ -0.94
RTN1-204ENST00000432103 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
RTN1-204ENST00000432103 KRTAP26-1Q6PEX3 210 aa9.19□□□□□ -0.94
RTN1-204ENST00000432103 COPS9Q8WXC6 57 aa9.19□□□□□ -0.94
RTN1-204ENST00000432103 PPDPFQ9H3Y8 114 aa9.19□□□□□ -0.94
RTN1-204ENST00000432103 F8WDY8 70 aa9.18□□□□□ -0.94
RTN1-204ENST00000432103 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
RTN1-204ENST00000432103 SPAG11BQ08648 103 aa9.17□□□□□ -0.94
RTN1-204ENST00000432103 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
RTN1-204ENST00000432103 PSCAO43653 123 aa9.16□□□□□ -0.94
RTN1-204ENST00000432103 MEIG1Q5JSS6 88 aa9.16□□□□□ -0.94
RTN1-204ENST00000432103 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
RTN1-204ENST00000432103 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
RTN1-204ENST00000432103 KIAA0087Q14695 138 aa9.15□□□□□ -0.94
RTN1-204ENST00000432103 LY6G6CO95867 125 aa9.14□□□□□ -0.95
RTN1-204ENST00000432103 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
RTN1-204ENST00000432103 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
RTN1-204ENST00000432103 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
RTN1-204ENST00000432103 GVQW2A0A096LPI5 108 aaPredicted RBP9.13□□□□□ -0.95
RTN1-204ENST00000432103 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
RTN1-204ENST00000432103 COX17Q14061 63 aa9.13□□□□□ -0.95
RTN1-204ENST00000432103 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
RTN1-204ENST00000432103 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
RTN1-204ENST00000432103 TRACP01848 142 aa9.12□□□□□ -0.95
RTN1-204ENST00000432103 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
RTN1-204ENST00000432103 C15orf56Q8N910 161 aa9.12□□□□□ -0.95
RTN1-204ENST00000432103 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
RTN1-204ENST00000432103 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
RTN1-204ENST00000432103 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
RTN1-204ENST00000432103 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
RTN1-204ENST00000432103 HIGD2BQ4VC39 106 aa9.1□□□□□ -0.95
RTN1-204ENST00000432103 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
RTN1-204ENST00000432103 LINC00158P58513 81 aa9.1□□□□□ -0.95
RTN1-204ENST00000432103 DAND5Q8N907 189 aa9.09□□□□□ -0.95
RTN1-204ENST00000432103 NPC2P61916 151 aa9.08□□□□□ -0.96
RTN1-204ENST00000432103 Q6ZR54 194 aa9.08□□□□□ -0.96
RTN1-204ENST00000432103 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
RTN1-204ENST00000432103 M0R2N4 97 aa9.08□□□□□ -0.96
RTN1-204ENST00000432103 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
RTN1-204ENST00000432103 SMIM20Q8N5G0 67 aa9.07□□□□□ -0.96
RTN1-204ENST00000432103 PFN2P35080 140 aa9.07□□□□□ -0.96
RTN1-204ENST00000432103 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
RTN1-204ENST00000432103 INAFM2P0DMQ5 153 aa9.06□□□□□ -0.96
RTN1-204ENST00000432103 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
RTN1-204ENST00000432103 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
RTN1-204ENST00000432103 STARD9Q9P2P6 4700 aa9.05□□□□□ -0.96
RTN1-204ENST00000432103 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
RTN1-204ENST00000432103 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 BAALC-AS2P0C853 105 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 UQCRQO14949 82 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
RTN1-204ENST00000432103 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
RTN1-204ENST00000432103 SOSTDC1Q6X4U4 206 aa9.03□□□□□ -0.96
RTN1-204ENST00000432103 Q6ZRU5 148 aa9.03□□□□□ -0.96
RTN1-204ENST00000432103 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.96
RTN1-204ENST00000432103 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.96
RTN1-204ENST00000432103 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.96
RTN1-204ENST00000432103 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.96
RTN1-204ENST00000432103 PLECQ15149 4684 aaKnown RBP9.02□□□□□ -0.97
RTN1-204ENST00000432103 LECT2O14960 151 aa9.02□□□□□ -0.97
RTN1-204ENST00000432103 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
RTN1-204ENST00000432103 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
RTN1-204ENST00000432103 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
RTN1-204ENST00000432103 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
RTN1-204ENST00000432103 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
RTN1-204ENST00000432103 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
RTN1-204ENST00000432103 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
RTN1-204ENST00000432103 C9orf153Q5TBE3 101 aa8.99□□□□□ -0.97
RTN1-204ENST00000432103 SND1-IT1Q9HBX3 110 aa8.98□□□□□ -0.97
RTN1-204ENST00000432103 COX7CP15954 63 aa8.97□□□□□ -0.97
RTN1-204ENST00000432103 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 H0YGX0 51 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 ATOX1O00244 68 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 Q8N814 137 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.97
RTN1-204ENST00000432103 A0A087WTM6 91 aa8.96□□□□□ -0.98
RTN1-204ENST00000432103 LCE6AA0A183 80 aa8.96□□□□□ -0.98
RTN1-204ENST00000432103 A0A1B0GX51 115 aa8.96□□□□□ -0.98
RTN1-204ENST00000432103 NDUFC2O95298 119 aa8.96□□□□□ -0.98
RTN1-204ENST00000432103 LYSTQ99698 3801 aa8.95□□□□□ -0.98
RTN1-204ENST00000432103 SLPIP03973 132 aa8.95□□□□□ -0.98
RTN1-204ENST00000432103 CRYGAP11844 174 aa8.95□□□□□ -0.98
RTN1-204ENST00000432103 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
RTN1-204ENST00000432103 RPL18AQ02543 176 aaKnown RBP8.94□□□□□ -0.98
RTN1-204ENST00000432103 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
RTN1-204ENST00000432103 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
RTN1-204ENST00000432103 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
RTN1-204ENST00000432103 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
RTN1-204ENST00000432103 Q6JHZ5 121 aa8.93□□□□□ -0.98
RTN1-204ENST00000432103 Q6ZRP5 223 aa8.92□□□□□ -0.98
RTN1-204ENST00000432103 DNAL4O96015 105 aa8.92□□□□□ -0.98
RTN1-204ENST00000432103 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
RTN1-204ENST00000432103 IGKV2-28A0A075B6P5 120 aa8.91□□□□□ -0.98
RTN1-204ENST00000432103 IGKV2D-28P01615 120 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms