RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PLEKHB2Q96CS7 222 aa4.76□□□□□ -1.65
CDH13-203ENST00000431540 SCGB3A1Q96QR1 104 aa4.76□□□□□ -1.65
CDH13-203ENST00000431540 PPDPFQ9H3Y8 114 aa4.76□□□□□ -1.65
CDH13-203ENST00000431540 SPINK1P00995 79 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
CDH13-203ENST00000431540 PMVKQ15126 192 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 COX19Q49B96 90 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 TMEM126AQ9H061 195 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 CST9LQ9H4G1 147 aa4.75□□□□□ -1.65
CDH13-203ENST00000431540 ZNF706Q9Y5V0 76 aaPredicted RBP4.75□□□□□ -1.65
CDH13-203ENST00000431540 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
CDH13-203ENST00000431540 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
CDH13-203ENST00000431540 ZC2HC1BQ5TFG8 222 aa4.74□□□□□ -1.65
CDH13-203ENST00000431540 VPREB1P12018 145 aa4.73□□□□□ -1.65
CDH13-203ENST00000431540 LINC01547P58512 204 aaPredicted RBP4.73□□□□□ -1.65
CDH13-203ENST00000431540 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
CDH13-203ENST00000431540 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
CDH13-203ENST00000431540 M0R378 163 aa4.72□□□□□ -1.65
CDH13-203ENST00000431540 RAB5BP61020 215 aa4.72□□□□□ -1.65
CDH13-203ENST00000431540 FA2HQ7L5A8 372 aa4.72□□□□□ -1.65
CDH13-203ENST00000431540 FAM19A2Q8N3H0 131 aa4.72□□□□□ -1.65
CDH13-203ENST00000431540 ANAPC11Q9NYG5 84 aa4.72□□□□□ -1.65
CDH13-203ENST00000431540 hCG_2014768A0A024R1R8 64 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 IGKV2-28A0A075B6P5 120 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 IGKV2D-28P01615 120 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 IGLC3P0DOY3 106 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 KRTAP13-3Q3SY46 172 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 NDUFA12Q9UI09 145 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 ERG28Q9UKR5 140 aa4.71□□□□□ -1.66
CDH13-203ENST00000431540 LINC00587B1AMM8 73 aa4.7□□□□□ -1.66
CDH13-203ENST00000431540 SPRR4Q96PI1 79 aa4.7□□□□□ -1.66
CDH13-203ENST00000431540 SPINK8P0C7L1 97 aa4.69□□□□□ -1.66
CDH13-203ENST00000431540 ADCYAP1P18509 176 aa4.69□□□□□ -1.66
CDH13-203ENST00000431540 PFN2P35080 140 aa4.69□□□□□ -1.66
CDH13-203ENST00000431540 PRLHP81277 87 aa4.69□□□□□ -1.66
CDH13-203ENST00000431540 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
CDH13-203ENST00000431540 PRYO14603 147 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 SPRR1AP35321 89 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 RAB14P61106 215 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 S100A12P80511 92 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 KCNQ1DNQ9H478 68 aa4.68□□□□□ -1.66
CDH13-203ENST00000431540 C5orf52A6NGY3 159 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 TMEM238C9JI98 176 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 SLC25A20O43772 301 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 ATP6V1G1O75348 118 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 S100PP25815 95 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 UQCC3Q6UW78 93 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 DAND5Q8N907 189 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 ZNF625Q96I27 306 aaPredicted RBP4.67□□□□□ -1.66
CDH13-203ENST00000431540 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
CDH13-203ENST00000431540 ZNF22P17026 224 aaPredicted RBP4.66□□□□□ -1.66
CDH13-203ENST00000431540 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
CDH13-203ENST00000431540 LOC107984156A0A0G2JMH3 177 aa4.65□□□□□ -1.67
CDH13-203ENST00000431540 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
CDH13-203ENST00000431540 LINC00614P0C842 121 aa4.65□□□□□ -1.67
CDH13-203ENST00000431540 HERV-K104P63124 156 aa4.65□□□□□ -1.67
CDH13-203ENST00000431540 KIAA1644Q3SXP7 199 aa4.65□□□□□ -1.67
CDH13-203ENST00000431540 ARL17AQ8IVW1 177 aa4.65□□□□□ -1.67
CDH13-203ENST00000431540 Q8NBF4 154 aa4.64□□□□□ -1.67
CDH13-203ENST00000431540 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
CDH13-203ENST00000431540 SCO1O75880 301 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 HBDP02042 147 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 LINC00158P58513 81 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 SMCR5Q8TEV8 140 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 SEC11CQ9BY50 192 aa4.63□□□□□ -1.67
CDH13-203ENST00000431540 TRAV12-1A0A0B4J245 112 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 TRBV10-2A0A0K0K1G8 114 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 ETDCA0A1B0GVM5 59 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 IFITM2Q01629 132 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 CLLU1Q5K131 121 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 Q8N377 158 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 CBY1Q9Y3M2 126 aa4.62□□□□□ -1.67
CDH13-203ENST00000431540 TMEM218A2RU14 115 aa4.61□□□□□ -1.67
CDH13-203ENST00000431540 NDUFA6P56556 154 aa4.61□□□□□ -1.67
CDH13-203ENST00000431540 JOSD1Q15040 202 aaPredicted RBP4.61□□□□□ -1.67
CDH13-203ENST00000431540 TMEM170BQ5T4T1 132 aa4.61□□□□□ -1.67
CDH13-203ENST00000431540 BAGE3Q86Y29 109 aa4.61□□□□□ -1.67
CDH13-203ENST00000431540 A0A096LNJ9 63 aa4.6□□□□□ -1.67
CDH13-203ENST00000431540 TMEM223A0PJW6 202 aa4.6□□□□□ -1.67
CDH13-203ENST00000431540 C11orf86A6NJI1 115 aa4.6□□□□□ -1.67
CDH13-203ENST00000431540 Q8NDZ9 215 aa4.6□□□□□ -1.67
CDH13-203ENST00000431540 B5MCH6 92 aa4.59□□□□□ -1.67
CDH13-203ENST00000431540 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
CDH13-203ENST00000431540 BOD1L2Q8IYS8 172 aa4.59□□□□□ -1.67
CDH13-203ENST00000431540 C18orf32Q8TCD1 76 aa4.59□□□□□ -1.67
CDH13-203ENST00000431540 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
CDH13-203ENST00000431540 MYMXA0A1B0GTQ4 84 aa4.58□□□□□ -1.68
CDH13-203ENST00000431540 NDUFC2O95298 119 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms