RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 MARF1Q9Y4F3 1742 aaKnown RBP-0.52□□□□□ -2.49
CDC40-204ENST00000431461 ZFYVE16Q7Z3T8 1539 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 TRBV7-7A0A0K0K1E9 115 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 H7BZZ5 65 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 COX6B2Q6YFQ2 88 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 ZNF720Q7Z2F6 126 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 SERP2Q8N6R1 65 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 TCEAL7Q9BRU2 100 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 CC2D2AQ9P2K1 1620 aa-0.53□□□□□ -2.49
CDC40-204ENST00000431461 LRP1BQ9NZR2 4599 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 NCOA3Q9Y6Q9 1424 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 KNDC1Q76NI1 1749 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 TMEM218A2RU14 115 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 S100PP25815 95 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 KRTAP19-8Q3LI54 63 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 HEPN1Q6WQI6 88 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 MAP1AP78559 2803 aaPredicted RBP-0.54□□□□□ -2.5
CDC40-204ENST00000431461 SAMD9Q5K651 1589 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 ANKRD36A6QL64 1941 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 CUX1P39880 1505 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 FYCO1Q9BQS8 1478 aa-0.54□□□□□ -2.5
CDC40-204ENST00000431461 SETD2Q9BYW2 2564 aaPredicted RBP-0.54□□□□□ -2.5
CDC40-204ENST00000431461 PTPN23Q9H3S7 1636 aa-0.55□□□□□ -2.5
CDC40-204ENST00000431461 LINC00587B1AMM8 73 aa-0.55□□□□□ -2.5
CDC40-204ENST00000431461 RPL38P63173 70 aaKnown RBP-0.55□□□□□ -2.5
CDC40-204ENST00000431461 DEFB112Q30KQ8 113 aa-0.55□□□□□ -2.5
CDC40-204ENST00000431461 KRTAP6-2Q3LI66 62 aa-0.55□□□□□ -2.5
CDC40-204ENST00000431461 PMCHL2Q9BQD1 86 aa-0.55□□□□□ -2.5
CDC40-204ENST00000431461 EPRSP07814 1512 aaKnown RBP-0.55□□□□□ -2.5
CDC40-204ENST00000431461 C5P01031 1676 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 KIF20BQ96Q89 1820 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 PRKDCP78527 4128 aaKnown RBP-0.56□□□□□ -2.5
CDC40-204ENST00000431461 UQCRHLA0A096LP55 91 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 ETDBQ3ZM63 59 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 MON2Q7Z3U7 1717 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 TEX14Q8IWB6 1497 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 CREBBPQ92793 2442 aa-0.56□□□□□ -2.5
CDC40-204ENST00000431461 SLIT1O75093 1534 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 D6R8Y8 96 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 MUSTN1Q8IVN3 82 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 DPY30Q9C005 99 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 BCORQ6W2J9 1755 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 ADAMTS12P58397 1594 aa-0.57□□□□□ -2.5
CDC40-204ENST00000431461 LEPROTL1O95214 131 aa-0.58□□□□□ -2.5
CDC40-204ENST00000431461 SMIM11AP58511 58 aa-0.58□□□□□ -2.5
CDC40-204ENST00000431461 ACBD7Q8N6N7 88 aa-0.58□□□□□ -2.5
CDC40-204ENST00000431461 SVEP1Q4LDE5 3571 aa-0.58□□□□□ -2.5
CDC40-204ENST00000431461 ANKRD36BQ8N2N9 1353 aa-0.58□□□□□ -2.5
CDC40-204ENST00000431461 FANCAO15360 1455 aa-0.59□□□□□ -2.5
CDC40-204ENST00000431461 RGPD8O14715 1765 aaPredicted RBP-0.59□□□□□ -2.5
CDC40-204ENST00000431461 RGPD5Q99666 1765 aa-0.59□□□□□ -2.5
CDC40-204ENST00000431461 ASIPP42127 132 aa-0.59□□□□□ -2.5
CDC40-204ENST00000431461 COL5A1-AS1Q5SY13 56 aa-0.59□□□□□ -2.5
CDC40-204ENST00000431461 WFDC13Q8IUB5 93 aa-0.59□□□□□ -2.5
CDC40-204ENST00000431461 FLGP20930 4061 aaPredicted RBP-0.59□□□□□ -2.5
CDC40-204ENST00000431461 NF1P21359 2839 aa-0.6□□□□□ -2.5
CDC40-204ENST00000431461 CICQ96RK0 1608 aaPredicted RBP-0.6□□□□□ -2.5
CDC40-204ENST00000431461 IGLC2P0DOY2 106 aa-0.6□□□□□ -2.51
CDC40-204ENST00000431461 IGLC3P0DOY3 106 aa-0.6□□□□□ -2.51
CDC40-204ENST00000431461 CLTCQ00610 1675 aaKnown RBP-0.6□□□□□ -2.51
CDC40-204ENST00000431461 RGPD2P0DJD1 1756 aa-0.6□□□□□ -2.51
CDC40-204ENST00000431461 UBR3Q6ZT12 1888 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 CRYBG1Q9Y4K1 1723 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 S100A10P60903 97 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 PKHD1P08F94 4074 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 QSER1Q2KHR3 1735 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 PKD1L3Q7Z443 1732 aa-0.61□□□□□ -2.51
CDC40-204ENST00000431461 MT-ATP8P03928 68 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 LRRC9Q6ZRR7 1453 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 MAGI2Q86UL8 1455 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 NRXN1Q9ULB1 1477 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 MXRA5Q9NR99 2828 aa-0.62□□□□□ -2.51
CDC40-204ENST00000431461 C9orf92A6NGG3 77 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 F8WEM9 126 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 COX7BP24311 80 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 FAUP35544 74 aaKnown RBP-0.63□□□□□ -2.51
CDC40-204ENST00000431461 C14orf144Q96I85 54 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 PREX1Q8TCU6 1659 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 SPTBN4Q9H254 2564 aa-0.63□□□□□ -2.51
CDC40-204ENST00000431461 CNTLNQ9NXG0 1405 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 ATP10BO94823 1461 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 A0A1B0GUT8 65 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 ATP6V1G2-DDX39BF2Z307 99 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 CYB5AP00167 134 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 GYPAP02724 150 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 RBP2P50120 134 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 PLGLAQ15195 96 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 LAMA5O15230 3695 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 TGP01266 2768 aa-0.64□□□□□ -2.51
CDC40-204ENST00000431461 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.65□□□□□ -2.51
CDC40-204ENST00000431461 MT1AP04731 61 aa-0.65□□□□□ -2.51
CDC40-204ENST00000431461 SPRR2FQ96RM1 72 aa-0.65□□□□□ -2.51
CDC40-204ENST00000431461 ALKQ9UM73 1620 aa-0.65□□□□□ -2.51
CDC40-204ENST00000431461 SONP18583 2426 aaKnown RBP-0.65□□□□□ -2.51
CDC40-204ENST00000431461 HMGN2P05204 90 aaKnown RBP-0.66□□□□□ -2.52
CDC40-204ENST00000431461 PEA15Q15121 130 aa-0.66□□□□□ -2.52
CDC40-204ENST00000431461 TROQ12816 1431 aaPredicted RBP-0.66□□□□□ -2.52
CDC40-204ENST00000431461 MYH4Q9Y623 1939 aa-0.66□□□□□ -2.52
CDC40-204ENST00000431461 KNL1Q8NG31 2342 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms