RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 TSPAN13O95857 204 aa6□□□□□ -1.45
HMGN1P38-201ENST00000431116 LINC00614P0C842 121 aa6□□□□□ -1.45
HMGN1P38-201ENST00000431116 CRYGAP11844 174 aa6□□□□□ -1.45
HMGN1P38-201ENST00000431116 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 APOC3P02656 99 aa5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 SND1-IT1Q9HBX3 110 aa5.99□□□□□ -1.45
HMGN1P38-201ENST00000431116 VPREB1P12018 145 aa5.98□□□□□ -1.45
HMGN1P38-201ENST00000431116 PRLHP81277 87 aa5.98□□□□□ -1.45
HMGN1P38-201ENST00000431116 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
HMGN1P38-201ENST00000431116 BAGE3Q86Y29 109 aa5.98□□□□□ -1.45
HMGN1P38-201ENST00000431116 ANAPC11Q9NYG5 84 aa5.98□□□□□ -1.45
HMGN1P38-201ENST00000431116 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 SNAPINO95295 136 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 RPL24P83731 157 aaKnown RBP5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 COX17Q14061 63 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 NDUFA5Q16718 116 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 SFTA2Q6UW10 78 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 FAM19A1Q7Z5A9 133 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 SVBPQ8N300 66 aa5.97□□□□□ -1.45
HMGN1P38-201ENST00000431116 TMEM126AQ9H061 195 aa5.96□□□□□ -1.46
HMGN1P38-201ENST00000431116 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.46
HMGN1P38-201ENST00000431116 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
HMGN1P38-201ENST00000431116 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
HMGN1P38-201ENST00000431116 Q8NDZ9 215 aa5.95□□□□□ -1.46
HMGN1P38-201ENST00000431116 M0R378 163 aa5.94□□□□□ -1.46
HMGN1P38-201ENST00000431116 LINC00158P58513 81 aa5.94□□□□□ -1.46
HMGN1P38-201ENST00000431116 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
HMGN1P38-201ENST00000431116 TMEM223A0PJW6 202 aa5.93□□□□□ -1.46
HMGN1P38-201ENST00000431116 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
HMGN1P38-201ENST00000431116 IFI27L1Q96BM0 104 aa5.93□□□□□ -1.46
HMGN1P38-201ENST00000431116 CHCHD1Q96BP2 118 aaKnown RBP5.93□□□□□ -1.46
HMGN1P38-201ENST00000431116 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
HMGN1P38-201ENST00000431116 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
HMGN1P38-201ENST00000431116 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
HMGN1P38-201ENST00000431116 RETNLBQ9BQ08 111 aa5.92□□□□□ -1.46
HMGN1P38-201ENST00000431116 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
HMGN1P38-201ENST00000431116 ATP6V1G1O75348 118 aa5.91□□□□□ -1.46
HMGN1P38-201ENST00000431116 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
HMGN1P38-201ENST00000431116 CBLN2Q8IUK8 224 aa5.91□□□□□ -1.46
HMGN1P38-201ENST00000431116 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
HMGN1P38-201ENST00000431116 HSBP1O75506 76 aa5.9□□□□□ -1.46
HMGN1P38-201ENST00000431116 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
HMGN1P38-201ENST00000431116 H0Y8G0 127 aa5.89□□□□□ -1.47
HMGN1P38-201ENST00000431116 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
HMGN1P38-201ENST00000431116 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
HMGN1P38-201ENST00000431116 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
HMGN1P38-201ENST00000431116 PLEKHB2Q96CS7 222 aa5.89□□□□□ -1.47
HMGN1P38-201ENST00000431116 NCR3O14931 201 aa5.88□□□□□ -1.47
HMGN1P38-201ENST00000431116 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
HMGN1P38-201ENST00000431116 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
HMGN1P38-201ENST00000431116 NDUFA12Q9UI09 145 aa5.88□□□□□ -1.47
HMGN1P38-201ENST00000431116 PRYO14603 147 aa5.87□□□□□ -1.47
HMGN1P38-201ENST00000431116 HERV-K104P63124 156 aa5.87□□□□□ -1.47
HMGN1P38-201ENST00000431116 SPRR4Q96PI1 79 aa5.87□□□□□ -1.47
HMGN1P38-201ENST00000431116 MUC2Q02817 5179 aa5.87□□□□□ -1.47
HMGN1P38-201ENST00000431116 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
HMGN1P38-201ENST00000431116 ZNF706Q9Y5V0 76 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P38-201ENST00000431116 TRBV10-3A0A0K0K1G6 114 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 A0A0U1RQV1 116 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 LINC00587B1AMM8 73 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 LEPROTL1O95214 131 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 TRGC2P03986 189 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 TSPEAR-AS2P59090 65 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 MAP1LC3CQ9BXW4 147 aa5.85□□□□□ -1.47
HMGN1P38-201ENST00000431116 IGLV7-46A0A075B6I9 117 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 ETDCA0A1B0GVM5 59 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 SERF1AO75920 110 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 SPRR1AP35321 89 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 LINC00310P59036 64 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 DAND5Q8N907 189 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.47
HMGN1P38-201ENST00000431116 PLNP26678 52 aa5.83□□□□□ -1.48
HMGN1P38-201ENST00000431116 CTAG1AP78358 180 aa5.83□□□□□ -1.48
HMGN1P38-201ENST00000431116 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
HMGN1P38-201ENST00000431116 CDIP1Q9H305 208 aa5.83□□□□□ -1.48
HMGN1P38-201ENST00000431116 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 LEPROTO15243 131 aa5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 S100A12P80511 92 aa5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 SMCR5Q8TEV8 140 aa5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 PMCHL2Q9BQD1 86 aa5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
HMGN1P38-201ENST00000431116 J3QQQ9 107 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 DPM2O94777 84 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 FABP4P15090 132 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 HERVK_113P61574 105 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 SPAG11AQ6PDA7 123 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 Q8NBF4 154 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 HSPB8Q9UJY1 196 aa5.81□□□□□ -1.48
HMGN1P38-201ENST00000431116 DDTP30046 118 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 NMUP48645 174 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 ANKRD39Q53RE8 183 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 MIEN1Q9BRT3 115 aa5.8□□□□□ -1.48
HMGN1P38-201ENST00000431116 LOC107984156A0A0G2JMH3 177 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms