RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 DEFB135Q30KP9 77 aa4.9□□□□□ -1.63
COL28A1-202ENST00000430711 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.63
COL28A1-202ENST00000430711 TRAV13-2A0A0B4J235 113 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 CXCL5P42830 114 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 HILS1P60008 231 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 C6orf226Q5I0X4 101 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 C2orf48Q96LS8 159 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 MRPL23Q16540 153 aaKnown RBP4.89□□□□□ -1.63
COL28A1-202ENST00000430711 LINC00612Q8N6U2 182 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 OBSCN-AS1Q96MR7 158 aa4.89□□□□□ -1.63
COL28A1-202ENST00000430711 LINC00643Q86TS7 51 aa4.88□□□□□ -1.63
COL28A1-202ENST00000430711 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
COL28A1-202ENST00000430711 LINC01561Q8N1V8 128 aa4.88□□□□□ -1.63
COL28A1-202ENST00000430711 LYSTQ99698 3801 aa4.88□□□□□ -1.63
COL28A1-202ENST00000430711 C16orf95Q9H693 158 aa4.88□□□□□ -1.63
COL28A1-202ENST00000430711 CFAP161Q6P656 301 aa4.87□□□□□ -1.63
COL28A1-202ENST00000430711 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 DNAL4O96015 105 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 CHCHD10Q8WYQ3 142 aaPredicted RBP4.86□□□□□ -1.63
COL28A1-202ENST00000430711 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 HTN3P15516 51 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
COL28A1-202ENST00000430711 KRTAP24-1Q3LI83 254 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
COL28A1-202ENST00000430711 IGHV4-28A0A0C4DH34 117 aa4.85□□□□□ -1.63
COL28A1-202ENST00000430711 ANGP03950 147 aaKnown RBP4.85□□□□□ -1.63
COL28A1-202ENST00000430711 ACYP1P07311 99 aa4.85□□□□□ -1.63
COL28A1-202ENST00000430711 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
COL28A1-202ENST00000430711 KIR2DL5BQ8NHK3 375 aa4.85□□□□□ -1.63
COL28A1-202ENST00000430711 Q8IZM0 81 aa4.85□□□□□ -1.63
COL28A1-202ENST00000430711 hADV29S1A0JD25 119 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 REG3AQ06141 175 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 COPS9Q8WXC6 57 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 FAM110AQ9BQ89 295 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 PRO0255Q9UI72 69 aa4.84□□□□□ -1.63
COL28A1-202ENST00000430711 A0A1B0GUV1 79 aa4.84□□□□□ -1.64
COL28A1-202ENST00000430711 INAFM2P0DMQ5 153 aa4.84□□□□□ -1.64
COL28A1-202ENST00000430711 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.64
COL28A1-202ENST00000430711 Q8N814 137 aa4.84□□□□□ -1.64
COL28A1-202ENST00000430711 XAGE1AQ9HD64 81 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 DNAH10Q8IVF4 4471 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 OXTP01178 125 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 RPL18AQ02543 176 aaKnown RBP4.83□□□□□ -1.64
COL28A1-202ENST00000430711 LINC00167Q96N53 147 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 RETNQ9HD89 108 aa4.83□□□□□ -1.64
COL28A1-202ENST00000430711 CSMD3Q7Z407 3707 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 H0YGX0 51 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 Q8NAQ8 132 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 ORMDL1Q9P0S3 153 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
COL28A1-202ENST00000430711 ENHOQ6UWT2 76 aa4.81□□□□□ -1.64
COL28A1-202ENST00000430711 A0A1B0GX51 115 aa4.81□□□□□ -1.64
COL28A1-202ENST00000430711 UPK3BQ9BT76 320 aa4.81□□□□□ -1.64
COL28A1-202ENST00000430711 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
COL28A1-202ENST00000430711 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
COL28A1-202ENST00000430711 CCKP06307 115 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 COX7CP15954 63 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 Q6JHZ5 121 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 RYR3Q15413 4870 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 USP17L23D6RBM5 183 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 UQCRQO14949 82 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 SPAG11BQ08648 103 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 C6orf48Q9UBA6 75 aa4.8□□□□□ -1.64
COL28A1-202ENST00000430711 TGP01266 2768 aa4.79□□□□□ -1.64
COL28A1-202ENST00000430711 DAD1P61803 113 aa4.79□□□□□ -1.64
COL28A1-202ENST00000430711 LINC00575Q6W349 94 aa4.79□□□□□ -1.64
COL28A1-202ENST00000430711 WFDC10BQ8IUB3 73 aa4.79□□□□□ -1.64
COL28A1-202ENST00000430711 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
COL28A1-202ENST00000430711 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
COL28A1-202ENST00000430711 Q6ZQY7 126 aa4.78□□□□□ -1.64
COL28A1-202ENST00000430711 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
COL28A1-202ENST00000430711 DSCR8Q96T75 97 aa4.78□□□□□ -1.64
COL28A1-202ENST00000430711 NDUFC2O95298 119 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 Q6ZQT0 140 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 SRRM2Q9UQ35 2752 aaKnown RBP4.77□□□□□ -1.65
COL28A1-202ENST00000430711 LYRM9A8MSI8 78 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 CRYGAP11844 174 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
COL28A1-202ENST00000430711 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
COL28A1-202ENST00000430711 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
COL28A1-202ENST00000430711 KRTAP26-1Q6PEX3 210 aa4.76□□□□□ -1.65
COL28A1-202ENST00000430711 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
COL28A1-202ENST00000430711 DNAH3Q8TD57 4116 aa4.76□□□□□ -1.65
COL28A1-202ENST00000430711 DNAH9Q9NYC9 4486 aa4.76□□□□□ -1.65
COL28A1-202ENST00000430711 TRAV10A0A0B4J240 114 aa4.75□□□□□ -1.65
COL28A1-202ENST00000430711 ATOX1O00244 68 aa4.75□□□□□ -1.65
COL28A1-202ENST00000430711 LYPD5Q6UWN5 251 aa4.75□□□□□ -1.65
COL28A1-202ENST00000430711 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms